BLASTX nr result

ID: Glycyrrhiza24_contig00026617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026617
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151942.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...    68   7e-10
emb|CBI28838.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like ...    68   9e-10
ref|XP_003540268.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...    63   3e-08
ref|XP_003527505.1| PREDICTED: LOW QUALITY PROTEIN: condensin co...    62   4e-08

>ref|XP_004151942.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Cucumis sativus] gi|449490353|ref|XP_004158580.1|
           PREDICTED: LOW QUALITY PROTEIN: condensin complex
           subunit 2-like [Cucumis sativus]
          Length = 667

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/40 (77%), Positives = 37/40 (92%)
 Frame = -3

Query: 180 MAETLSPNPTMGQKQRLPVAARIQSPTSPFFLGSNDDQLE 61
           MAETLSPNP++ QKQR PV +++QSPTSPFFLGSNDD+LE
Sbjct: 1   MAETLSPNPSIPQKQRRPVPSQLQSPTSPFFLGSNDDKLE 40


>emb|CBI28838.3| unnamed protein product [Vitis vinifera]
          Length = 669

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/40 (82%), Positives = 35/40 (87%)
 Frame = -3

Query: 180 MAETLSPNPTMGQKQRLPVAARIQSPTSPFFLGSNDDQLE 61
           MAETLSPNP   QKQR  ++ARIQSPTSPFFLGSNDDQLE
Sbjct: 1   MAETLSPNPATVQKQRALMSARIQSPTSPFFLGSNDDQLE 40


>ref|XP_002270622.1| PREDICTED: condensin complex subunit 2-like [Vitis vinifera]
          Length = 674

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/40 (82%), Positives = 35/40 (87%)
 Frame = -3

Query: 180 MAETLSPNPTMGQKQRLPVAARIQSPTSPFFLGSNDDQLE 61
           MAETLSPNP   QKQR  ++ARIQSPTSPFFLGSNDDQLE
Sbjct: 1   MAETLSPNPATVQKQRALMSARIQSPTSPFFLGSNDDQLE 40


>ref|XP_003540268.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Glycine max]
          Length = 685

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = -3

Query: 180 MAETLSPNPTMGQKQRLPVAARIQSPTSPFFLGSNDDQLE 61
           MAE L PNPT   K+ +P++ARIQSPTSPFF+GSN+DQLE
Sbjct: 1   MAEALGPNPTTDHKKTVPMSARIQSPTSPFFVGSNNDQLE 40


>ref|XP_003527505.1| PREDICTED: LOW QUALITY PROTEIN: condensin complex subunit 2-like
           [Glycine max]
          Length = 680

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/40 (80%), Positives = 34/40 (85%)
 Frame = -3

Query: 180 MAETLSPNPTMGQKQRLPVAARIQSPTSPFFLGSNDDQLE 61
           MAETLSPNP MG+KQRL    RIQSPTSPF LGSN+DQLE
Sbjct: 1   MAETLSPNPAMGRKQRL----RIQSPTSPFVLGSNNDQLE 36


Top