BLASTX nr result

ID: Glycyrrhiza24_contig00026615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026615
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554055.1| PREDICTED: dof zinc finger protein DOF5.2-li...    75   6e-12
gb|ACU18311.1| unknown [Glycine max]                                   75   6e-12
ref|XP_003521879.1| PREDICTED: LOW QUALITY PROTEIN: dof zinc fin...    74   1e-11
ref|XP_002325441.1| f-box family protein [Populus trichocarpa] g...    63   3e-08
ref|XP_002319195.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>ref|XP_003554055.1| PREDICTED: dof zinc finger protein DOF5.2-like [Glycine max]
          Length = 483

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 50/107 (46%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
 Frame = +2

Query: 2   TGPASMQWCPAPPMMAVPTIFPPNNNTPLQFVPAGSYWHRT---------VSIGSNGXXX 154
           TGP +MQWCP P M+A+P + PP+   PLQFVP  SYW  T         VSIGSN    
Sbjct: 315 TGPTAMQWCPTP-MVAIPGMCPPS--IPLQFVPP-SYWSGTPLWNAGTGAVSIGSNACLS 370

Query: 155 XXXXXXXXXXXXXXXXXXXXKHTRDH--TDEERSEMCVFVPKTLRID 289
                               KHTRD   TDEE+SE CV VPKT+RID
Sbjct: 371 PTSSTNNSCCSGNGSPTLG-KHTRDTVCTDEEKSEKCVLVPKTIRID 416


>gb|ACU18311.1| unknown [Glycine max]
          Length = 483

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 50/107 (46%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
 Frame = +2

Query: 2   TGPASMQWCPAPPMMAVPTIFPPNNNTPLQFVPAGSYWHRT---------VSIGSNGXXX 154
           TGP +MQWCP P M+A+P + PP+   PLQFVP  SYW  T         VSIGSN    
Sbjct: 315 TGPTAMQWCPTP-MVAIPGMCPPS--IPLQFVPP-SYWSGTPLWNAGTGAVSIGSNACLS 370

Query: 155 XXXXXXXXXXXXXXXXXXXXKHTRDH--TDEERSEMCVFVPKTLRID 289
                               KHTRD   TDEE+SE CV VPKT+RID
Sbjct: 371 PTSSTNNSCCSGNGSPTLG-KHTRDTVCTDEEKSEKCVLVPKTIRID 416


>ref|XP_003521879.1| PREDICTED: LOW QUALITY PROTEIN: dof zinc finger protein DOF3.3-like
           [Glycine max]
          Length = 482

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 50/107 (46%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
 Frame = +2

Query: 2   TGPASMQWCPAPPMMAVPTIFPPNNNTPLQFVPAGSYWHRT---------VSIGSNGXXX 154
           TGPA+MQWCP P M+A+P + PP+   PLQFVP  SYW  T         VSIGSN    
Sbjct: 315 TGPAAMQWCPTP-MVAIPGMCPPS--IPLQFVPP-SYWSGTQLWNAGTGTVSIGSNACLS 370

Query: 155 XXXXXXXXXXXXXXXXXXXXKHTRDH--TDEERSEMCVFVPKTLRID 289
                               KHTRD   T+EE+SE CV VPKT+RID
Sbjct: 371 PSSSTSNSCCSGNGSPTLG-KHTRDTVCTNEEKSEKCVSVPKTIRID 416


>ref|XP_002325441.1| f-box family protein [Populus trichocarpa]
           gi|222862316|gb|EEE99822.1| f-box family protein
           [Populus trichocarpa]
          Length = 493

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 45/107 (42%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
 Frame = +2

Query: 8   PASMQWCPAPPMMAVPTIFPPNNNTPLQFVPAGSYWH----------RTVSIGSNGXXXX 157
           P  +Q CP P M+AVP+I PPN   PLQFVPA SYW                GSNG    
Sbjct: 326 PTQVQLCPTP-MLAVPSICPPN--IPLQFVPA-SYWGCMPTWTAGTGNVPLCGSNGCLTP 381

Query: 158 XXXXXXXXXXXXXXXXXXXKHTRDHT--DEERSEMCVFVPKTLRIDD 292
                              KH+RD    DEE++E C+ VPKTLRIDD
Sbjct: 382 SSSTTTSYCSGNGSPKLG-KHSRDSKFMDEEKTEKCILVPKTLRIDD 427


>ref|XP_002319195.1| predicted protein [Populus trichocarpa] gi|222857571|gb|EEE95118.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/106 (39%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
 Frame = +2

Query: 8   PASMQWCPAPPMMAVPTIFPPNNNTPLQFVPAGSYWH---------RTVSIGSNGXXXXX 160
           P  +Q C + PM+AVP+I PPN   PLQFVPA SYW          R VS+  +      
Sbjct: 327 PNQVQLC-STPMLAVPSICPPN--IPLQFVPA-SYWGCMPTWAAGTRNVSLSGSNGCLSL 382

Query: 161 XXXXXXXXXXXXXXXXXXKHTRDHT--DEERSEMCVFVPKTLRIDD 292
                             KH+RD    +EE++E C+ VPKTLRIDD
Sbjct: 383 STSANTSSCSGNGSPTLGKHSRDSKFMEEEKAEKCILVPKTLRIDD 428


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