BLASTX nr result

ID: Glycyrrhiza24_contig00026603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026603
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM...   210   8e-53
ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago...   198   4e-49
ref|XP_002447746.1| hypothetical protein SORBIDRAFT_06g014970 [S...   184   5e-45
gb|EEE60929.1| hypothetical protein OsJ_14663 [Oryza sativa Japo...   182   2e-44
gb|EEC77214.1| hypothetical protein OsI_15746 [Oryza sativa Indi...   182   2e-44

>ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM1-like [Glycine max]
          Length = 505

 Score =  210 bits (535), Expect = 8e-53
 Identities = 94/108 (87%), Positives = 101/108 (93%)
 Frame = -1

Query: 325 VPRTCPFYKKLPGTTFTVDAFRYGFVEGCSAYFLSHFHADHYGGLSKKWSHGPIYCSPLT 146
           V R+CPFYKK+PGT FTVDAFRYG VEGCSAYFL+HFH DHYGGLSKKWSHGPIYCSPLT
Sbjct: 162 VTRSCPFYKKMPGTMFTVDAFRYGCVEGCSAYFLTHFHCDHYGGLSKKWSHGPIYCSPLT 221

Query: 145 GKLLQTCLSVNPLYIYPLEFNYGHVIDGVKVTLLEANHCPGAALIHFD 2
           G+L+Q CLSVNPLYI+PLEFN  HVIDGVKVTLLEANHCPGAALIHF+
Sbjct: 222 GRLVQMCLSVNPLYIHPLEFNEEHVIDGVKVTLLEANHCPGAALIHFN 269


>ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago truncatula]
           gi|87241310|gb|ABD33168.1| DNA repair
           metallo-beta-lactamase [Medicago truncatula]
           gi|355499554|gb|AES80757.1| DNA cross-link repair
           protein SNM1 [Medicago truncatula]
          Length = 511

 Score =  198 bits (503), Expect = 4e-49
 Identities = 88/108 (81%), Positives = 98/108 (90%)
 Frame = -1

Query: 325 VPRTCPFYKKLPGTTFTVDAFRYGFVEGCSAYFLSHFHADHYGGLSKKWSHGPIYCSPLT 146
           V R+CPFYKK+PGT FTVDAFRYG VE CSAYFLSHFHADHYGGLSKKWSHGPIYCSPLT
Sbjct: 168 VTRSCPFYKKMPGTNFTVDAFRYGCVEECSAYFLSHFHADHYGGLSKKWSHGPIYCSPLT 227

Query: 145 GKLLQTCLSVNPLYIYPLEFNYGHVIDGVKVTLLEANHCPGAALIHFD 2
           G+L+Q CL VNP YI PLEF+  +VIDG+KVTL++ANHCPGAALIHF+
Sbjct: 228 GRLVQMCLYVNPSYICPLEFDTEYVIDGIKVTLIDANHCPGAALIHFE 275


>ref|XP_002447746.1| hypothetical protein SORBIDRAFT_06g014970 [Sorghum bicolor]
           gi|241938929|gb|EES12074.1| hypothetical protein
           SORBIDRAFT_06g014970 [Sorghum bicolor]
          Length = 496

 Score =  184 bits (468), Expect = 5e-45
 Identities = 83/106 (78%), Positives = 91/106 (85%)
 Frame = -1

Query: 322 PRTCPFYKKLPGTTFTVDAFRYGFVEGCSAYFLSHFHADHYGGLSKKWSHGPIYCSPLTG 143
           P  CPFYKK+PGT FTVDAFRYG VEGCSAYFLSHFH DHYGGL+KKW HGPIYCS LT 
Sbjct: 153 PLACPFYKKIPGTPFTVDAFRYGQVEGCSAYFLSHFHHDHYGGLTKKWCHGPIYCSALTA 212

Query: 142 KLLQTCLSVNPLYIYPLEFNYGHVIDGVKVTLLEANHCPGAALIHF 5
           +L++ CLSVN  YIYPLE +  +VI+GV VTLLEANHCPGAALIHF
Sbjct: 213 RLVKMCLSVNSDYIYPLELDTNYVIEGVTVTLLEANHCPGAALIHF 258


>gb|EEE60929.1| hypothetical protein OsJ_14663 [Oryza sativa Japonica Group]
          Length = 517

 Score =  182 bits (462), Expect = 2e-44
 Identities = 81/106 (76%), Positives = 91/106 (85%)
 Frame = -1

Query: 322 PRTCPFYKKLPGTTFTVDAFRYGFVEGCSAYFLSHFHADHYGGLSKKWSHGPIYCSPLTG 143
           P  CPFYKK+PGT FTVDAFRYG VEGC+AYFLSHFH DHYGGL+KKW HGPIYC+ LT 
Sbjct: 138 PLACPFYKKIPGTPFTVDAFRYGAVEGCNAYFLSHFHHDHYGGLTKKWCHGPIYCTALTA 197

Query: 142 KLLQTCLSVNPLYIYPLEFNYGHVIDGVKVTLLEANHCPGAALIHF 5
           +L++ CLSVNP YI PLE +  +VI+GV VTLLEANHCPGAALIHF
Sbjct: 198 RLVKMCLSVNPEYICPLELDKEYVIEGVSVTLLEANHCPGAALIHF 243


>gb|EEC77214.1| hypothetical protein OsI_15746 [Oryza sativa Indica Group]
          Length = 418

 Score =  182 bits (462), Expect = 2e-44
 Identities = 81/106 (76%), Positives = 91/106 (85%)
 Frame = -1

Query: 322 PRTCPFYKKLPGTTFTVDAFRYGFVEGCSAYFLSHFHADHYGGLSKKWSHGPIYCSPLTG 143
           P  CPFYKK+PGT FTVDAFRYG VEGC+AYFLSHFH DHYGGL+KKW HGPIYC+ LT 
Sbjct: 138 PLACPFYKKIPGTPFTVDAFRYGAVEGCNAYFLSHFHHDHYGGLTKKWCHGPIYCTALTA 197

Query: 142 KLLQTCLSVNPLYIYPLEFNYGHVIDGVKVTLLEANHCPGAALIHF 5
           +L++ CLSVNP YI PLE +  +VI+GV VTLLEANHCPGAALIHF
Sbjct: 198 RLVKMCLSVNPEYICPLELDKEYVIEGVSVTLLEANHCPGAALIHF 243


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