BLASTX nr result

ID: Glycyrrhiza24_contig00026594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026594
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535828.1| conserved hypothetical protein [Ricinus comm...    84   1e-14
tpg|DAA47075.1| TPA: hypothetical protein ZEAMMB73_027346 [Zea m...    67   1e-09
ref|XP_003609382.1| Structural maintenance of chromosomes protei...    67   2e-09
ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medica...    66   3e-09
ref|XP_002517741.1| conserved hypothetical protein [Ricinus comm...    64   1e-08

>ref|XP_002535828.1| conserved hypothetical protein [Ricinus communis]
           gi|255608154|ref|XP_002538850.1| conserved hypothetical
           protein [Ricinus communis] gi|223510119|gb|EEF23533.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223521805|gb|EEF26555.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 86

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/49 (81%), Positives = 42/49 (85%)
 Frame = -3

Query: 401 GRGGSTRSVEFRRKTVGSRWRHFFGPLQKKGNAGRVKLGRGFENRVGSC 255
           G GGSTRSV+FRRKTVGSRWR FFGPLQK+     VKLGRGFENRVGSC
Sbjct: 37  GGGGSTRSVKFRRKTVGSRWRPFFGPLQKEMRGRGVKLGRGFENRVGSC 85


>tpg|DAA47075.1| TPA: hypothetical protein ZEAMMB73_027346 [Zea mays]
          Length = 88

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = -2

Query: 399 EGRIDPFSRIPKKDCWQQVETFLWPPSK 316
           EGRIDPFSRIPKKDCWQQVETFLWPPSK
Sbjct: 61  EGRIDPFSRIPKKDCWQQVETFLWPPSK 88


>ref|XP_003609382.1| Structural maintenance of chromosomes protein [Medicago truncatula]
           gi|355510437|gb|AES91579.1| Structural maintenance of
           chromosomes protein [Medicago truncatula]
          Length = 661

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = -3

Query: 398 RGGSTRSVEFRRKTVGSRWRHFFGPLQKKGNAG 300
           RGGST SVEFRRKTVGS WRHFFGPL+KKGNAG
Sbjct: 434 RGGSTPSVEFRRKTVGSMWRHFFGPLKKKGNAG 466


>ref|XP_003588268.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477316|gb|AES58519.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 556

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = -3

Query: 395 GGSTRSVEFRRKTVGSRWRHFFGPLQKKGN 306
           GGSTRSVEFRRKTVGSRWRHFFGPL+KKGN
Sbjct: 243 GGSTRSVEFRRKTVGSRWRHFFGPLKKKGN 272


>ref|XP_002517741.1| conserved hypothetical protein [Ricinus communis]
           gi|223543139|gb|EEF44673.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 111

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/45 (75%), Positives = 36/45 (80%)
 Frame = -1

Query: 400 GGEDRPVQ*NSEERLLAAGGDISLAPFKKKEMRAGLSSVEGSRIG 266
           G EDRPVQ N EERLLA GGD+SLA FK+K   AGLSS EGSRIG
Sbjct: 67  GEEDRPVQSNFEERLLAVGGDLSLALFKRKCRGAGLSSAEGSRIG 111


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