BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026580
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36411.1| unknown [Lotus japonicus]                              117   1e-24
ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24
ref|XP_003629914.1| Pentatricopeptide repeat-containing protein ...   105   5e-21
ref|XP_002331875.1| predicted protein [Populus trichocarpa] gi|2...    95   5e-18
ref|XP_002519753.1| pentatricopeptide repeat-containing protein,...    91   7e-17

>gb|AFK36411.1| unknown [Lotus japonicus]
          Length = 167

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/72 (79%), Positives = 62/72 (86%)
 Frame = -3

Query: 242 LFRQMPSRDVISWTCIISGLDRNGRSEQALVLFHDMVASGVRPTSITLVCGLSAAAKVQA 63
           LF QMP RDVISWT II+GLDRNGRSEQALVLF  MVASGV P+S TLVCGLSAAAK+ A
Sbjct: 89  LFHQMPLRDVISWTSIIAGLDRNGRSEQALVLFQSMVASGVNPSSTTLVCGLSAAAKISA 148

Query: 62  FHLGLQIHCSVF 27
            H GLQIHC++F
Sbjct: 149 LHPGLQIHCTLF 160


>ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/82 (70%), Positives = 69/82 (84%)
 Frame = -3

Query: 248 LRLFRQMPSRDVISWTCIISGLDRNGRSEQALVLFHDMVASGVRPTSITLVCGLSAAAKV 69
           L+LF QMPSRDVISW+ +I+GLD NG+SEQALVLF DMVASGV  +S  LVCGLSAAAK+
Sbjct: 201 LQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKI 260

Query: 68  QAFHLGLQIHCSVFKLGCFCLD 3
            A+ +G+QIHCSVFKLG +  D
Sbjct: 261 PAWRVGIQIHCSVFKLGDWHFD 282


>ref|XP_003629914.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355523936|gb|AET04390.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/81 (67%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
 Frame = -3

Query: 248 LRLFRQMPSRDVISWTCIISGLDRNGRSEQALVLFHDMVA-SGVRPTSITLVCGLSAAAK 72
           LRLF QMPSRDVISWT II GLDRNG+S QAL  F +MV  SGV  +S TLVCGLSAAAK
Sbjct: 205 LRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAK 264

Query: 71  VQAFHLGLQIHCSVFKLGCFC 9
           +  F+ G+QIHC +FK G  C
Sbjct: 265 ILDFYAGIQIHCCMFKFGFCC 285


>ref|XP_002331875.1| predicted protein [Populus trichocarpa] gi|222875393|gb|EEF12524.1|
           predicted protein [Populus trichocarpa]
          Length = 675

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 46/79 (58%), Positives = 56/79 (70%)
 Frame = -3

Query: 248 LRLFRQMPSRDVISWTCIISGLDRNGRSEQALVLFHDMVASGVRPTSITLVCGLSAAAKV 69
           +RLF +MP RDVISWT +I GLD NG+SE+AL +F  M+ SGV PT  T  C LSA A  
Sbjct: 156 VRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANA 215

Query: 68  QAFHLGLQIHCSVFKLGCF 12
             F+LG+Q+H  V KLGCF
Sbjct: 216 VEFNLGVQVHGHVVKLGCF 234


>ref|XP_002519753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541170|gb|EEF42726.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 562

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 43/77 (55%), Positives = 57/77 (74%)
 Frame = -3

Query: 248 LRLFRQMPSRDVISWTCIISGLDRNGRSEQALVLFHDMVASGVRPTSITLVCGLSAAAKV 69
           L LF +MP R+VISWT +I GLD+NG+SE+AL+LF  M+ SGV+PTS T  C L+A A  
Sbjct: 252 LNLFEKMPCRNVISWTSMIGGLDQNGKSEEALILFGKMMDSGVKPTSTTYACVLTACANA 311

Query: 68  QAFHLGLQIHCSVFKLG 18
             F++G+Q+H  V KLG
Sbjct: 312 MDFNMGVQVHGRVSKLG 328



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 24/76 (31%), Positives = 43/76 (56%)
 Frame = -3

Query: 245 RLFRQMPSRDVISWTCIISGLDRNGRSEQALVLFHDMVASGVRPTSITLVCGLSAAAKVQ 66
           ++F +  S++V+ WT +++G + N + E AL +F DM+  GV P   T +   ++   ++
Sbjct: 354 QVFNETLSKNVVIWTALLTGCELNSKHEDALRVFSDMIKMGVFPNQSTFISAFNSCRGLE 413

Query: 65  AFHLGLQIHCSVFKLG 18
           A   G +IH    KLG
Sbjct: 414 ALDRGKEIHTVTAKLG 429