BLASTX nr result

ID: Glycyrrhiza24_contig00026577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026577
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helica...   227   7e-58
ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helica...   224   6e-57
ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [M...   216   1e-54
ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   201   7e-50
emb|CBI15516.3| unnamed protein product [Vitis vinifera]              201   7e-50

>ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1180

 Score =  227 bits (579), Expect = 7e-58
 Identities = 110/120 (91%), Positives = 115/120 (95%)
 Frame = +2

Query: 2    KHLAESAKAQFAARDYSDHLALVRAYDGWKDAEAQQAGYEYCWRNFLSSQTLRAIDSLRK 181
            K LAESAKAQFAARDYSDHLAL+RAYDGW+DAEAQQAGYEYCWRNFLSSQTLRAIDSLRK
Sbjct: 813  KDLAESAKAQFAARDYSDHLALIRAYDGWRDAEAQQAGYEYCWRNFLSSQTLRAIDSLRK 872

Query: 182  QFLYLLKDIGLVDSNSETYNKWSHEEHLVRTVICAGLFPGISSVVNKDKSIALKTMEDGQ 361
            QF YLLKDI LV++NSETYN WSHEEHL+R VICAGLFPGISSVVNKDKSIALKTMEDGQ
Sbjct: 873  QFFYLLKDICLVNNNSETYNTWSHEEHLLRAVICAGLFPGISSVVNKDKSIALKTMEDGQ 932


>ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1177

 Score =  224 bits (571), Expect = 6e-57
 Identities = 108/120 (90%), Positives = 114/120 (95%)
 Frame = +2

Query: 2    KHLAESAKAQFAARDYSDHLALVRAYDGWKDAEAQQAGYEYCWRNFLSSQTLRAIDSLRK 181
            K LAESAKAQ AAR YSDHLAL+RAY+GW+DAEAQQAGYEYCWRNFLSSQTLRAIDSLRK
Sbjct: 810  KDLAESAKAQLAARGYSDHLALIRAYEGWRDAEAQQAGYEYCWRNFLSSQTLRAIDSLRK 869

Query: 182  QFLYLLKDIGLVDSNSETYNKWSHEEHLVRTVICAGLFPGISSVVNKDKSIALKTMEDGQ 361
            QF YLLKDIGLV++NSETYN WSHEEHL+R VICAGLFPGISSVVNKDKSIALKTMEDGQ
Sbjct: 870  QFFYLLKDIGLVNNNSETYNTWSHEEHLLRAVICAGLFPGISSVVNKDKSIALKTMEDGQ 929


>ref|XP_003631052.1| ATP-dependent RNA helicase A-like protein [Medicago truncatula]
            gi|355525074|gb|AET05528.1| ATP-dependent RNA helicase
            A-like protein [Medicago truncatula]
          Length = 1214

 Score =  216 bits (551), Expect = 1e-54
 Identities = 106/120 (88%), Positives = 113/120 (94%)
 Frame = +2

Query: 2    KHLAESAKAQFAARDYSDHLALVRAYDGWKDAEAQQAGYEYCWRNFLSSQTLRAIDSLRK 181
            K LAESAKAQ AAR YSDHLALVRAYDGWKDAEAQQAGYE+CWRNFLSSQTLRAIDSLRK
Sbjct: 846  KDLAESAKAQIAARGYSDHLALVRAYDGWKDAEAQQAGYEFCWRNFLSSQTLRAIDSLRK 905

Query: 182  QFLYLLKDIGLVDSNSETYNKWSHEEHLVRTVICAGLFPGISSVVNKDKSIALKTMEDGQ 361
            QF +LLKDIGLV +NSET NKWS+EEHL+R VICAGLFPGISSVVNK+KSI+LKTMEDGQ
Sbjct: 906  QFFHLLKDIGLVGNNSETNNKWSNEEHLLRAVICAGLFPGISSVVNKEKSISLKTMEDGQ 965


>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
            vinifera]
          Length = 1178

 Score =  201 bits (510), Expect = 7e-50
 Identities = 93/120 (77%), Positives = 109/120 (90%)
 Frame = +2

Query: 2    KHLAESAKAQFAARDYSDHLALVRAYDGWKDAEAQQAGYEYCWRNFLSSQTLRAIDSLRK 181
            K LAESAKA F+ R +SDHLALV+AY+GWK+AE QQ+GYEYCWRNFLS+QTL+AIDSLR+
Sbjct: 811  KDLAESAKALFSGRTFSDHLALVQAYEGWKEAERQQSGYEYCWRNFLSAQTLKAIDSLRR 870

Query: 182  QFLYLLKDIGLVDSNSETYNKWSHEEHLVRTVICAGLFPGISSVVNKDKSIALKTMEDGQ 361
            QF YLLKD GLV++N+E  NKWSH+EHL+R VICAGLFPGI SVVNK+KSI+LKTMEDGQ
Sbjct: 871  QFFYLLKDAGLVENNTEACNKWSHDEHLIRAVICAGLFPGICSVVNKEKSISLKTMEDGQ 930


>emb|CBI15516.3| unnamed protein product [Vitis vinifera]
          Length = 1057

 Score =  201 bits (510), Expect = 7e-50
 Identities = 93/120 (77%), Positives = 109/120 (90%)
 Frame = +2

Query: 2    KHLAESAKAQFAARDYSDHLALVRAYDGWKDAEAQQAGYEYCWRNFLSSQTLRAIDSLRK 181
            K LAESAKA F+ R +SDHLALV+AY+GWK+AE QQ+GYEYCWRNFLS+QTL+AIDSLR+
Sbjct: 690  KDLAESAKALFSGRTFSDHLALVQAYEGWKEAERQQSGYEYCWRNFLSAQTLKAIDSLRR 749

Query: 182  QFLYLLKDIGLVDSNSETYNKWSHEEHLVRTVICAGLFPGISSVVNKDKSIALKTMEDGQ 361
            QF YLLKD GLV++N+E  NKWSH+EHL+R VICAGLFPGI SVVNK+KSI+LKTMEDGQ
Sbjct: 750  QFFYLLKDAGLVENNTEACNKWSHDEHLIRAVICAGLFPGICSVVNKEKSISLKTMEDGQ 809


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