BLASTX nr result

ID: Glycyrrhiza24_contig00026575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026575
         (1059 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522327.1| PREDICTED: F-box only protein 13-like [Glyci...   464   e-128
ref|XP_003526091.1| PREDICTED: F-box only protein 13-like [Glyci...   458   e-127
ref|XP_003544575.1| PREDICTED: F-box only protein 13-like [Glyci...   445   e-123
ref|NP_001240018.1| uncharacterized protein LOC100801096 [Glycin...   441   e-121
ref|XP_002308504.1| f-box family protein [Populus trichocarpa] g...   346   6e-93

>ref|XP_003522327.1| PREDICTED: F-box only protein 13-like [Glycine max]
          Length = 413

 Score =  464 bits (1193), Expect = e-128
 Identities = 229/270 (84%), Positives = 246/270 (91%)
 Frame = -3

Query: 811 SLKRKSPENEDHLLTNSFSLDDLNEDLFERVLSWLPTSSFFRLTSVCKRWKSVATSTSFK 632
           +LKRKSPEN + +L N+FSLDDLNEDLFER+LSWLPTS+FFRL SVCKRWKSVA S SFK
Sbjct: 11  NLKRKSPENGERVLFNTFSLDDLNEDLFERILSWLPTSTFFRLNSVCKRWKSVAASASFK 70

Query: 631 LACSRIPSRDPWFLMVAPNLNQSVIFDSAESTWKRLNHPPLLLEESNQSCMPVAASGGLI 452
           LACS IPSRDPWFLMVAPNLNQSVI DSAESTWKRLNHPPLL EESNQ C+PVAASGGLI
Sbjct: 71  LACSHIPSRDPWFLMVAPNLNQSVILDSAESTWKRLNHPPLLQEESNQDCVPVAASGGLI 130

Query: 451 CYRKLSGNFIVSNPVTGSCSELPPLHFPPQHDQPLNAIVMTTTSKDQLSFKIVLVSGELP 272
           CYRK SGNFIV+NPVTGSC +LPPL F  Q +QPLNAIVM+T+SKDQLSFKIVLV GELP
Sbjct: 131 CYRKSSGNFIVTNPVTGSCRKLPPLQFASQ-NQPLNAIVMSTSSKDQLSFKIVLVFGELP 189

Query: 271 NFLFKVYSSSSGCWEDETALRRKDEDSSMEYDSTDDNVVYFLSKAGIVVASNMQRSPSKQ 92
           N LFKVY+S S CWE ETALRRK ED+S+EYDSTDDNVVYFLSKAG VVASNMQRSPSKQ
Sbjct: 190 NLLFKVYNSGSNCWEGETALRRKTEDNSIEYDSTDDNVVYFLSKAGFVVASNMQRSPSKQ 249

Query: 91  YSSVITNKDGKEIVYFLSSSGTVVACNLTC 2
           +SSVITNKDG+EIVYFLSSSG VVACNLTC
Sbjct: 250 FSSVITNKDGQEIVYFLSSSGNVVACNLTC 279


>ref|XP_003526091.1| PREDICTED: F-box only protein 13-like [Glycine max]
          Length = 413

 Score =  458 bits (1179), Expect = e-127
 Identities = 228/270 (84%), Positives = 244/270 (90%)
 Frame = -3

Query: 811 SLKRKSPENEDHLLTNSFSLDDLNEDLFERVLSWLPTSSFFRLTSVCKRWKSVATSTSFK 632
           SLKRKSPEN DH+L N+FSLDDLNEDLFER+LSWL TS+FFRL SVCKRWKSVA S SFK
Sbjct: 11  SLKRKSPENGDHVLFNTFSLDDLNEDLFERILSWLQTSTFFRLNSVCKRWKSVAASASFK 70

Query: 631 LACSRIPSRDPWFLMVAPNLNQSVIFDSAESTWKRLNHPPLLLEESNQSCMPVAASGGLI 452
           LACS IPSR+PWFLMVAPNLNQSVIFDSAESTWKRLNHP LL EESNQ CMPVAASGGLI
Sbjct: 71  LACSHIPSREPWFLMVAPNLNQSVIFDSAESTWKRLNHPSLLQEESNQDCMPVAASGGLI 130

Query: 451 CYRKLSGNFIVSNPVTGSCSELPPLHFPPQHDQPLNAIVMTTTSKDQLSFKIVLVSGELP 272
           CYRK SGNFIV+NPVTGSC ELPPL    Q +QPL+AIVM+T+SKDQ+SFKIVLV GELP
Sbjct: 131 CYRKSSGNFIVTNPVTGSCRELPPLQLASQ-NQPLDAIVMSTSSKDQISFKIVLVFGELP 189

Query: 271 NFLFKVYSSSSGCWEDETALRRKDEDSSMEYDSTDDNVVYFLSKAGIVVASNMQRSPSKQ 92
           N LFKVY+S S CWE ETALRRK ED+SMEYDSTDDNVVYFLSKAGIVVASNMQRSPSKQ
Sbjct: 190 NLLFKVYNSGSNCWEGETALRRKTEDNSMEYDSTDDNVVYFLSKAGIVVASNMQRSPSKQ 249

Query: 91  YSSVITNKDGKEIVYFLSSSGTVVACNLTC 2
           +SSVITNK+ +EIVYFLS SG VVACNLTC
Sbjct: 250 FSSVITNKNDQEIVYFLSYSGNVVACNLTC 279


>ref|XP_003544575.1| PREDICTED: F-box only protein 13-like [Glycine max]
          Length = 407

 Score =  445 bits (1145), Expect = e-123
 Identities = 220/273 (80%), Positives = 246/273 (90%), Gaps = 1/273 (0%)
 Frame = -3

Query: 820 MEHSLKRKSPENEDHLLTNSFSLDDLNEDLFERVLSWLPTSSFFRLTSVCKRWKSVATST 641
           MEHSLKRKSPE+ D+LL +SFSLDDLNEDL ERVLSWLPTSSFFRLTSVCKRWKS A S 
Sbjct: 1   MEHSLKRKSPESGDNLLFSSFSLDDLNEDLLERVLSWLPTSSFFRLTSVCKRWKSAAASV 60

Query: 640 SFKLACSRIPSRDPWFLMVAPNLNQSVIFDSAESTWKRLNHPPLLLEESNQSCMPVAASG 461
           SFKLACSR+P RDPWFLMVAPNLNQS++FD+AE++WKRLNHP L L++SN SCMPVAASG
Sbjct: 61  SFKLACSRVPLRDPWFLMVAPNLNQSIVFDTAENSWKRLNHPHLPLKDSNISCMPVAASG 120

Query: 460 GLICYRKLSGNFIVSNPVTGSCSELPPLHFPPQHDQPLNAIVMTTTSKDQLSFKIVLVSG 281
           GL+CYRKLSGNFIV NPVTGSC+ELPPLHF P+ +Q LNA+VM+TT  DQLS+KIVLV G
Sbjct: 121 GLVCYRKLSGNFIVCNPVTGSCTELPPLHFTPE-NQSLNAVVMSTTFNDQLSYKIVLVFG 179

Query: 280 ELPNFLFKVYSSSSGCWEDETALRRKDEDSSMEYDST-DDNVVYFLSKAGIVVASNMQRS 104
           ELPN LFKVY+SSSGCWEDE ALRR  +D+S++ DST DDNVVYFLSKAG VVAS+M RS
Sbjct: 180 ELPNLLFKVYNSSSGCWEDEAALRRNVDDNSLDCDSTDDDNVVYFLSKAGTVVASSMHRS 239

Query: 103 PSKQYSSVITNKDGKEIVYFLSSSGTVVACNLT 5
           PSKQYSSVITNK+G+E VYFLSSSG VVACNLT
Sbjct: 240 PSKQYSSVITNKEGQETVYFLSSSGMVVACNLT 272


>ref|NP_001240018.1| uncharacterized protein LOC100801096 [Glycine max]
           gi|255638928|gb|ACU19766.1| unknown [Glycine max]
          Length = 407

 Score =  441 bits (1133), Expect = e-121
 Identities = 219/273 (80%), Positives = 242/273 (88%), Gaps = 1/273 (0%)
 Frame = -3

Query: 820 MEHSLKRKSPENEDHLLTNSFSLDDLNEDLFERVLSWLPTSSFFRLTSVCKRWKSVATST 641
           MEHSLKRKSPE+ D+LL N FSLDDLNEDL ERVLSWLPTSSFFRLTSVCKRWKS A S 
Sbjct: 1   MEHSLKRKSPESGDNLLFNRFSLDDLNEDLLERVLSWLPTSSFFRLTSVCKRWKSAAASV 60

Query: 640 SFKLACSRIPSRDPWFLMVAPNLNQSVIFDSAESTWKRLNHPPLLLEESNQSCMPVAASG 461
           SFKLACS +PSRDPWFLMVAPNLNQS++FD+AE++WKRLNH  L LE+SN SCMPVAASG
Sbjct: 61  SFKLACSHVPSRDPWFLMVAPNLNQSIVFDTAENSWKRLNHLHLPLEDSNISCMPVAASG 120

Query: 460 GLICYRKLSGNFIVSNPVTGSCSELPPLHFPPQHDQPLNAIVMTTTSKDQLSFKIVLVSG 281
           GL+CYRKL GNF+V NPVTGSCSELPPLHF  + +Q LNA+VM+TT  DQ+S+KIVLV G
Sbjct: 121 GLVCYRKLLGNFVVCNPVTGSCSELPPLHFALE-NQSLNAVVMSTTFNDQMSYKIVLVFG 179

Query: 280 ELPNFLFKVYSSSSGCWEDETALRRKDEDSSMEYDST-DDNVVYFLSKAGIVVASNMQRS 104
           ELPN LFKVY+S S CWEDE ALRR  +D+SM+ DST DDNVVYFLSKAG VV S+MQRS
Sbjct: 180 ELPNLLFKVYNSGSSCWEDEAALRRNVDDNSMDCDSTDDDNVVYFLSKAGTVVVSSMQRS 239

Query: 103 PSKQYSSVITNKDGKEIVYFLSSSGTVVACNLT 5
           PSKQYSSVITNKDG+EIVYFLSSSGTVVACNLT
Sbjct: 240 PSKQYSSVITNKDGQEIVYFLSSSGTVVACNLT 272


>ref|XP_002308504.1| f-box family protein [Populus trichocarpa]
           gi|222854480|gb|EEE92027.1| f-box family protein
           [Populus trichocarpa]
          Length = 409

 Score =  346 bits (887), Expect = 6e-93
 Identities = 178/274 (64%), Positives = 212/274 (77%)
 Frame = -3

Query: 826 WSMEHSLKRKSPENEDHLLTNSFSLDDLNEDLFERVLSWLPTSSFFRLTSVCKRWKSVAT 647
           W+   S KRK    +  +L  S S+D+LNEDL ERVLSWLPTS+FFR  SVCKRWKSV+ 
Sbjct: 7   WASRASRKRKLEAQDKGML--SLSMDELNEDLLERVLSWLPTSAFFRAASVCKRWKSVSD 64

Query: 646 STSFKLACSRIPSRDPWFLMVAPNLNQSVIFDSAESTWKRLNHPPLLLEESNQSCMPVAA 467
           S SFKLACS IPSR+PWFLMV P+LNQS IFDSA+ +WK+LN+PPLL + SN   +PVAA
Sbjct: 65  SASFKLACSEIPSREPWFLMVDPHLNQSTIFDSADRSWKKLNYPPLLKQSSNCDSIPVAA 124

Query: 466 SGGLICYRKLSGNFIVSNPVTGSCSELPPLHFPPQHDQPLNAIVMTTTSKDQLSFKIVLV 287
           SGGL+C+   + NFIV NPVTGSC ELPP+H   Q    L A+ M   +++  S+K+VLV
Sbjct: 125 SGGLVCFHMGACNFIVCNPVTGSCRELPPVH-AAQETHSLLAVAM--NAQNNQSYKLVLV 181

Query: 286 SGELPNFLFKVYSSSSGCWEDETALRRKDEDSSMEYDSTDDNVVYFLSKAGIVVASNMQR 107
           SGELP    KVY+SS+GCW +E  LRRK  D S E+DS DDN VYFLSKAG VVA++MQR
Sbjct: 182 SGELPKLSCKVYNSSTGCWGEEIFLRRK-VDESQEFDSNDDNAVYFLSKAGNVVATDMQR 240

Query: 106 SPSKQYSSVITNKDGKEIVYFLSSSGTVVACNLT 5
           SPSKQYSSVIT KDG+EIVYFLSSSGT+V+CNLT
Sbjct: 241 SPSKQYSSVITVKDGEEIVYFLSSSGTIVSCNLT 274


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