BLASTX nr result

ID: Glycyrrhiza24_contig00026567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026567
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592677.1| mscS family protein, putative [Medicago trun...   144   1e-32
ref|XP_003555851.1| PREDICTED: uncharacterized mscS family prote...   139   3e-31
ref|XP_003555850.1| PREDICTED: uncharacterized mscS family prote...   139   3e-31
ref|XP_002317440.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|NP_177982.1| mechanosensitive channel of small conductance-l...   111   5e-23

>ref|XP_003592677.1| mscS family protein, putative [Medicago truncatula]
           gi|355481725|gb|AES62928.1| mscS family protein,
           putative [Medicago truncatula]
          Length = 926

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/83 (80%), Positives = 70/83 (84%)
 Frame = -3

Query: 249 YKKTHFSLWILLEWMSXXXXXXXXXXXLCVPILRDKNLWQLKLWKWEVMILVLICGRLVS 70
           YKKTHFSLWILLEW+S            CVP+LR+K LWQLKLWKWEVMILVLICGRLVS
Sbjct: 293 YKKTHFSLWILLEWLSLILIIGASVTTFCVPLLREKKLWQLKLWKWEVMILVLICGRLVS 352

Query: 69  DWVIRIAVFCIERNFLLRKRVLY 1
           DWVIRIAVFCIERNFLLRKRVLY
Sbjct: 353 DWVIRIAVFCIERNFLLRKRVLY 375


>ref|XP_003555851.1| PREDICTED: uncharacterized mscS family protein At1g78610-like
           isoform 2 [Glycine max]
          Length = 868

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/103 (66%), Positives = 76/103 (73%)
 Frame = -3

Query: 309 GKKSXXXXXXXXXXXXXXXEYKKTHFSLWILLEWMSXXXXXXXXXXXLCVPILRDKNLWQ 130
           GKK+               E+K+THFSLWILLEW+S           LCVP LR+K+LWQ
Sbjct: 235 GKKNDEEDEDPFLEEDLPDEFKETHFSLWILLEWLSLILIIGLLITTLCVPFLRNKDLWQ 294

Query: 129 LKLWKWEVMILVLICGRLVSDWVIRIAVFCIERNFLLRKRVLY 1
           L+LWKWEVM+LVLICGRLVSDWVIRIAVFCIERNFLLRKRVLY
Sbjct: 295 LRLWKWEVMVLVLICGRLVSDWVIRIAVFCIERNFLLRKRVLY 337


>ref|XP_003555850.1| PREDICTED: uncharacterized mscS family protein At1g78610-like
           isoform 1 [Glycine max]
          Length = 870

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/103 (66%), Positives = 76/103 (73%)
 Frame = -3

Query: 309 GKKSXXXXXXXXXXXXXXXEYKKTHFSLWILLEWMSXXXXXXXXXXXLCVPILRDKNLWQ 130
           GKK+               E+K+THFSLWILLEW+S           LCVP LR+K+LWQ
Sbjct: 237 GKKNDEEDEDPFLEEDLPDEFKETHFSLWILLEWLSLILIIGLLITTLCVPFLRNKDLWQ 296

Query: 129 LKLWKWEVMILVLICGRLVSDWVIRIAVFCIERNFLLRKRVLY 1
           L+LWKWEVM+LVLICGRLVSDWVIRIAVFCIERNFLLRKRVLY
Sbjct: 297 LRLWKWEVMVLVLICGRLVSDWVIRIAVFCIERNFLLRKRVLY 339


>ref|XP_002317440.1| predicted protein [Populus trichocarpa] gi|222860505|gb|EEE98052.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/83 (63%), Positives = 62/83 (74%)
 Frame = -3

Query: 249 YKKTHFSLWILLEWMSXXXXXXXXXXXLCVPILRDKNLWQLKLWKWEVMILVLICGRLVS 70
           YKK    +WILLEW+S           L +P LR KNLW+L+LWKWEV++LVLICGRLVS
Sbjct: 71  YKKDRLDIWILLEWLSLIIIIAALVCSLAIPYLRTKNLWRLRLWKWEVLVLVLICGRLVS 130

Query: 69  DWVIRIAVFCIERNFLLRKRVLY 1
            WVI++ VF IERNFLLRKRVLY
Sbjct: 131 GWVIKVIVFFIERNFLLRKRVLY 153


>ref|NP_177982.1| mechanosensitive channel of small conductance-like 6 [Arabidopsis
           thaliana] gi|75213461|sp|Q9SYM1.1|MSL6_ARATH RecName:
           Full=Mechanosensitive ion channel protein 6; AltName:
           Full=Mechanosensitive channel of small conductance-like
           6; AltName: Full=MscS-Like protein 6
           gi|4836872|gb|AAD30575.1|AC007260_6 Hypothetical protein
           [Arabidopsis thaliana] gi|332198006|gb|AEE36127.1|
           mechanosensitive channel of small conductance-like 6
           [Arabidopsis thaliana]
          Length = 856

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/83 (61%), Positives = 61/83 (73%)
 Frame = -3

Query: 249 YKKTHFSLWILLEWMSXXXXXXXXXXXLCVPILRDKNLWQLKLWKWEVMILVLICGRLVS 70
           Y+K   SLWI+LEW+S           L +P LR K LW+L+LWKWE M+LVLICGRLVS
Sbjct: 233 YRKDKLSLWIVLEWLSLILIIAGFVCTLAIPSLRKKKLWELQLWKWESMVLVLICGRLVS 292

Query: 69  DWVIRIAVFCIERNFLLRKRVLY 1
            W+++I VF IERNFLLRKRVLY
Sbjct: 293 SWIVKIVVFFIERNFLLRKRVLY 315


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