BLASTX nr result

ID: Glycyrrhiza24_contig00026522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026522
         (491 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556612.1| PREDICTED: xyloglucan galactosyltransferase ...   173   1e-41
ref|XP_002888666.1| exostosin family protein [Arabidopsis lyrata...   134   1e-29
ref|NP_177014.1| Exostosin family protein [Arabidopsis thaliana]...   129   2e-28
dbj|BAC42883.1| unknown protein [Arabidopsis thaliana]                129   2e-28
ref|XP_002336132.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25

>ref|XP_003556612.1| PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog
           [Glycine max]
          Length = 465

 Score =  173 bits (439), Expect = 1e-41
 Identities = 88/142 (61%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
 Frame = -3

Query: 423 INYSSSIISGNRLIRFTLLSCLFLASWFLLLH-FQFPXXXXXXXXXXXXXXXXXTCDGSV 247
           I++S +    N  +R+T+ SCLFLASW L+LH F F                   CDGS 
Sbjct: 23  ISFSKTKDPHNNKLRYTIFSCLFLASWLLILHRFNFTILAPSTTTTTPT------CDGSK 76

Query: 246 GQFFIYTLPSRFNLGLLDHCQHLNIYTNMCPHVTNNGLGQPLSKTTTTTWYATHQFIAEM 67
             F+IY LPSRFNLGLL+ CQ LNIYTNMCPHV NNGLGQPLS   T  WY+THQFIAEM
Sbjct: 77  PLFYIYNLPSRFNLGLLERCQSLNIYTNMCPHVANNGLGQPLS---TPDWYSTHQFIAEM 133

Query: 66  IVHARLENHPCRTWDPNDAVLF 1
           IVHARLENHPCRTWDP  AVLF
Sbjct: 134 IVHARLENHPCRTWDPYTAVLF 155


>ref|XP_002888666.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334507|gb|EFH64925.1| exostosin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 457

 Score =  134 bits (336), Expect = 1e-29
 Identities = 64/130 (49%), Positives = 82/130 (63%)
 Frame = -3

Query: 390 RLIRFTLLSCLFLASWFLLLHFQFPXXXXXXXXXXXXXXXXXTCDGSVGQFFIYTLPSRF 211
           +LI  TLL    +   FL+LHF F                           ++Y LP  F
Sbjct: 32  KLIVLTLLLSFSICFLFLILHFPFTTEFTASIPRKCYHNFTV---------YVYDLPKEF 82

Query: 210 NLGLLDHCQHLNIYTNMCPHVTNNGLGQPLSKTTTTTWYATHQFIAEMIVHARLENHPCR 31
           N+G+L +C+HLNIYTNMCPHV NNGLGQPL ++  T+W+ATHQFIAEMI HAR++NHPCR
Sbjct: 83  NIGILQNCRHLNIYTNMCPHVANNGLGQPLYRSGRTSWFATHQFIAEMIFHARVKNHPCR 142

Query: 30  TWDPNDAVLF 1
           T +PN+A +F
Sbjct: 143 TCEPNNADIF 152


>ref|NP_177014.1| Exostosin family protein [Arabidopsis thaliana]
           gi|12324886|gb|AAG52396.1|AC011915_10 hypothetical
           protein; 19613-17891 [Arabidopsis thaliana]
           gi|332196676|gb|AEE34797.1| Exostosin family protein
           [Arabidopsis thaliana]
          Length = 455

 Score =  129 bits (325), Expect = 2e-28
 Identities = 66/129 (51%), Positives = 84/129 (65%), Gaps = 1/129 (0%)
 Frame = -3

Query: 384 IRFTLLSCLFLAS-WFLLLHFQFPXXXXXXXXXXXXXXXXXTCDGSVGQFFIYTLPSRFN 208
           ++ TLL+ L L S  FL L   FP                  CD +    ++Y LP  FN
Sbjct: 31  VKLTLLTLLLLCSICFLFLTLNFPFTIEFTASIPRT------CDHNF-TVYVYDLPKEFN 83

Query: 207 LGLLDHCQHLNIYTNMCPHVTNNGLGQPLSKTTTTTWYATHQFIAEMIVHARLENHPCRT 28
           +GLL +C+HLNIYTNMCPHV NNGLGQPL +   T+W++THQFIAEMI HAR+ENHPCRT
Sbjct: 84  IGLLQNCRHLNIYTNMCPHVANNGLGQPLHR-GRTSWFSTHQFIAEMIFHARVENHPCRT 142

Query: 27  WDPNDAVLF 1
           ++P+ A +F
Sbjct: 143 YEPDTADIF 151


>dbj|BAC42883.1| unknown protein [Arabidopsis thaliana]
          Length = 455

 Score =  129 bits (325), Expect = 2e-28
 Identities = 66/129 (51%), Positives = 84/129 (65%), Gaps = 1/129 (0%)
 Frame = -3

Query: 384 IRFTLLSCLFLAS-WFLLLHFQFPXXXXXXXXXXXXXXXXXTCDGSVGQFFIYTLPSRFN 208
           ++ TLL+ L L S  FL L   FP                  CD +    ++Y LP  FN
Sbjct: 31  VKLTLLTLLLLCSICFLFLTLNFPFTIEFTASIPRT------CDHNF-TVYVYDLPKEFN 83

Query: 207 LGLLDHCQHLNIYTNMCPHVTNNGLGQPLSKTTTTTWYATHQFIAEMIVHARLENHPCRT 28
           +GLL +C+HLNIYTNMCPHV NNGLGQPL +   T+W++THQFIAEMI HAR+ENHPCRT
Sbjct: 84  IGLLQNCRHLNIYTNMCPHVANNGLGQPLHR-GRTSWFSTHQFIAEMIFHARVENHPCRT 142

Query: 27  WDPNDAVLF 1
           ++P+ A +F
Sbjct: 143 YEPDTADIF 151


>ref|XP_002336132.1| predicted protein [Populus trichocarpa] gi|222873674|gb|EEF10805.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score =  120 bits (300), Expect = 2e-25
 Identities = 55/91 (60%), Positives = 65/91 (71%), Gaps = 4/91 (4%)
 Frame = -3

Query: 261 CDGSVGQFFIYTLPSRFNLGLLDHCQHLNIYTNMCPHVTNNGLGQPLS----KTTTTTWY 94
           C+G +   ++Y +P+ FN GLL  C HLN YT+MCPHV N GLGQPLS        TTW+
Sbjct: 22  CEGGMS-VYLYDMPAEFNKGLLKDCSHLNAYTDMCPHVANRGLGQPLSYMAESAVATTWF 80

Query: 93  ATHQFIAEMIVHARLENHPCRTWDPNDAVLF 1
           ATHQFIAEMI HAR+ENHPCR  DP +A LF
Sbjct: 81  ATHQFIAEMIFHARMENHPCRVLDPINAKLF 111


Top