BLASTX nr result

ID: Glycyrrhiza24_contig00026500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026500
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627583.1| hypothetical protein MTR_8g030800, partial [...   177   1e-42
ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781...   174   7e-42
ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806...   164   7e-39
ref|XP_003623963.1| Mediator of RNA polymerase II transcription ...   151   6e-35
ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782...   140   1e-31

>ref|XP_003627583.1| hypothetical protein MTR_8g030800, partial [Medicago truncatula]
            gi|355521605|gb|AET02059.1| hypothetical protein
            MTR_8g030800, partial [Medicago truncatula]
          Length = 1823

 Score =  177 bits (448), Expect = 1e-42
 Identities = 96/138 (69%), Positives = 108/138 (78%), Gaps = 4/138 (2%)
 Frame = +1

Query: 1    PQLTEALQIYLNERRLILRGPLREHHDDASS--AKISSLKRKQYSASSKDGASTVSNDQW 174
            PQL EALQ YL ERRLILR    +  DDA++  AK+ +LKRK+  ASSKDG STVS DQW
Sbjct: 895  PQLIEALQTYLTERRLILRNSPSDPRDDANANNAKLPTLKRKRNPASSKDGTSTVSTDQW 954

Query: 175  KTVPSNTVSSKNAKDDASIEELKVAISVLLQLPNSVSNLTTAACDESEGSVRRPT--HYS 348
            KTV S T SSK+AKD AS+EELK  ISVLLQLPNS+SNL +  CDESE SVR+PT  HY 
Sbjct: 955  KTVQS-TASSKSAKDGASMEELKETISVLLQLPNSLSNLNSTGCDESESSVRKPTWPHYG 1013

Query: 349  KIDPVEGTPGCEECRRAK 402
            K +PVEGTPGCEECRRAK
Sbjct: 1014 KTEPVEGTPGCEECRRAK 1031


>ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781696 [Glycine max]
          Length = 2240

 Score =  174 bits (441), Expect = 7e-42
 Identities = 95/136 (69%), Positives = 110/136 (80%), Gaps = 2/136 (1%)
 Frame = +1

Query: 1    PQLTEALQIYLNERRLILRGPLREHHDDASSAKISSLKRKQYSASSKDGASTVSNDQWKT 180
            PQL EALQIYLNERRLILRGPL   HDDA+ + +S+LK+K+Y AS+KD  S V  DQ + 
Sbjct: 751  PQLKEALQIYLNERRLILRGPLSMSHDDANGSNLSALKKKKYPASTKDEVSAVPIDQ-RN 809

Query: 181  VPSNTVSSKNAKDDASIEELKVAISVLLQLPNSVSNLTTAACDESEGSVRRP--THYSKI 354
            V S T+SSK+AKD+A+IEEL+ AISVLLQLPN  SNL+T   DESEGSVRRP  + YSKI
Sbjct: 810  VISTTISSKSAKDNANIEELRTAISVLLQLPNCSSNLSTTG-DESEGSVRRPIGSPYSKI 868

Query: 355  DPVEGTPGCEECRRAK 402
            DPVEGTPGCEEC RAK
Sbjct: 869  DPVEGTPGCEECSRAK 884


>ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806985 [Glycine max]
          Length = 2279

 Score =  164 bits (415), Expect = 7e-39
 Identities = 85/135 (62%), Positives = 104/135 (77%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1    PQLTEALQIYLNERRLILRGPLREHHDDASSAKISSLKRKQYSASSKDGASTVSNDQWKT 180
            P+LTEALQ+YLNERR ILRG L E+H +A++  ISSLK+   ++S+KD  STVS D WK+
Sbjct: 776  PRLTEALQVYLNERRFILRGSLWENHGNANNVNISSLKQNHCTSSTKDKTSTVSIDPWKS 835

Query: 181  VPSNTVSSKNAKDDASIEELKVAISVLLQLPNSVSNLTTAACDESEGSVRRPT-HYSKID 357
            V SN  SSKNAKDD  +EELK  IS LLQLP S+SNL+T   DES+GSVR+P   ++K D
Sbjct: 836  VFSNKTSSKNAKDDNGVEELKTFISTLLQLPKSLSNLSTTGLDESQGSVRKPIGSHNKSD 895

Query: 358  PVEGTPGCEECRRAK 402
             VE TPGCEECR+AK
Sbjct: 896  LVEATPGCEECRKAK 910


>ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago
            truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid
            dehydrogenase, lipoyl-binding site [Medicago truncatula]
            gi|355498978|gb|AES80181.1| Mediator of RNA polymerase II
            transcription subunit [Medicago truncatula]
          Length = 2270

 Score =  151 bits (381), Expect = 6e-35
 Identities = 80/135 (59%), Positives = 101/135 (74%), Gaps = 1/135 (0%)
 Frame = +1

Query: 1    PQLTEALQIYLNERRLILRGPLREHHDDASSAKISSLKRKQYSASSKDGASTVSNDQWKT 180
            P L EAL  YLNERRLILRG   E+HD+ASSA   ++ +K  ++S+KDG+STVS DQ KT
Sbjct: 772  PLLIEALHDYLNERRLILRGSFSENHDNASSANGFAVNQKHCTSSAKDGSSTVSIDQRKT 831

Query: 181  VPSNTVSSKNAKDDASIEELKVAISVLLQLPNSVSNLTTAACDESEGSVRRPTH-YSKID 357
            +PS+ +S K  KD   +++LK AISVLLQLP S+SNLT     ES+GSV+RP   ++KID
Sbjct: 832  IPSSKISYKAEKDGNGVDDLKKAISVLLQLPKSLSNLTITGLGESQGSVKRPFRCHNKID 891

Query: 358  PVEGTPGCEECRRAK 402
             +E TPGCEECRRAK
Sbjct: 892  VMEATPGCEECRRAK 906


>ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782672 [Glycine max]
          Length = 2235

 Score =  140 bits (352), Expect = 1e-31
 Identities = 85/135 (62%), Positives = 98/135 (72%), Gaps = 2/135 (1%)
 Frame = +1

Query: 4    QLTEALQIYLNERRLILRGPLREHHDDASSAKISSLKRKQYSASSKDGASTVSNDQWKTV 183
            QL EALQIYLNERRLILRG    H   +  + +S+LK+K+Y AS+KD    V  DQ + V
Sbjct: 752  QLKEALQIYLNERRLILRG----HLSVSCGSNLSALKKKKYPASTKDEVFAVPIDQ-RNV 806

Query: 184  PSNTVSSKNAKDDASIEELKVAISVLLQLPNSVSNLTTAACDESEGSVRRP--THYSKID 357
             S T+SSKNAKD  +IEEL+ AISVLLQLPN  SNL+T   DESEGS RR   + Y KID
Sbjct: 807  ISTTISSKNAKD-TNIEELRTAISVLLQLPNCSSNLSTTG-DESEGSDRRAIGSPYGKID 864

Query: 358  PVEGTPGCEECRRAK 402
            PVEGTPGCEEC RAK
Sbjct: 865  PVEGTPGCEECSRAK 879


Top