BLASTX nr result

ID: Glycyrrhiza24_contig00026499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026499
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48553.1| unknown [Lotus japonicus]                               84   1e-14
ref|XP_003591875.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    82   5e-14
ref|XP_003608306.1| F-box/LRR-repeat protein [Medicago truncatul...    82   6e-14
ref|XP_003608293.1| FBD-associated F-box protein [Medicago trunc...    82   6e-14
ref|XP_003606068.1| F-box/LRR-repeat protein [Medicago truncatul...    82   6e-14

>gb|AFK48553.1| unknown [Lotus japonicus]
          Length = 110

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/64 (62%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
 Frame = +2

Query: 86  MSDSAGEIMLPPKTKRGKHDETEN--EENTDRLSDLPDCVLLHILSFLNAKYAVRTCVLS 259
           MS+S  E++L P  KRG+ +E E   EEN DRLSDLPDC+LL+ILSF+ AK+ V+TCVLS
Sbjct: 1   MSNSTDEMLLQPNAKRGRRNEIETDIEENKDRLSDLPDCILLYILSFVKAKHVVQTCVLS 60

Query: 260 TRWK 271
            RWK
Sbjct: 61  KRWK 64


>ref|XP_003591875.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355480923|gb|AES62126.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 702

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 39/62 (62%), Positives = 50/62 (80%)
 Frame = +2

Query: 86  MSDSAGEIMLPPKTKRGKHDETENEENTDRLSDLPDCVLLHILSFLNAKYAVRTCVLSTR 265
           MS+ A E+M+ PK KR +HD    E+N DRLSDLPDC++LHILSFLN+K+ V+TC+LS R
Sbjct: 1   MSNLADEVMISPK-KRARHDN--EEKNQDRLSDLPDCLILHILSFLNSKHTVQTCILSKR 57

Query: 266 WK 271
           WK
Sbjct: 58  WK 59


>ref|XP_003608306.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355509361|gb|AES90503.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 600

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/49 (73%), Positives = 45/49 (91%)
 Frame = +2

Query: 128 KRGKHDETENEENTDRLSDLPDCVLLHILSFLNAKYAVRTCVLSTRWKH 274
           K+ +  ETENEEN D+LSDLP+CV+LHILSFL++K+AV+TCVLSTRWKH
Sbjct: 2   KKIRQCETENEENEDKLSDLPECVILHILSFLDSKHAVQTCVLSTRWKH 50


>ref|XP_003608293.1| FBD-associated F-box protein [Medicago truncatula]
           gi|355509348|gb|AES90490.1| FBD-associated F-box protein
           [Medicago truncatula]
          Length = 798

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/63 (63%), Positives = 49/63 (77%)
 Frame = +2

Query: 86  MSDSAGEIMLPPKTKRGKHDETENEENTDRLSDLPDCVLLHILSFLNAKYAVRTCVLSTR 265
           MS S  E+M+PP  KR + D   NEEN DRL+DLPDCV+LHILSFL +K+ V+T +LSTR
Sbjct: 1   MSKSVDEVMIPPD-KRVRRD---NEENQDRLTDLPDCVILHILSFLKSKFVVQTSILSTR 56

Query: 266 WKH 274
           WKH
Sbjct: 57  WKH 59


>ref|XP_003606068.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355507123|gb|AES88265.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 861

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 36/49 (73%), Positives = 45/49 (91%)
 Frame = +2

Query: 128 KRGKHDETENEENTDRLSDLPDCVLLHILSFLNAKYAVRTCVLSTRWKH 274
           K+ +  ETENEEN D+LSDLP+CV+LHILSFL++K+AV+TCVLSTRWKH
Sbjct: 2   KKIRQCETENEENEDKLSDLPECVILHILSFLDSKHAVQTCVLSTRWKH 50


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