BLASTX nr result

ID: Glycyrrhiza24_contig00026485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026485
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522745.1| PREDICTED: rhamnogalacturonate lyase B-like ...   151   6e-35
ref|XP_003603707.1| Rhamnogalacturonate lyase [Medicago truncatu...   148   4e-34
ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
ref|XP_002306520.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_003526528.1| PREDICTED: rhamnogalacturonate lyase-like [G...   115   5e-24

>ref|XP_003522745.1| PREDICTED: rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  151 bits (381), Expect = 6e-35
 Identities = 75/84 (89%), Positives = 78/84 (92%)
 Frame = +1

Query: 1   PIFIYFNSLSDGLSPINLWEDAKQQMVNEIESWPYTFPASEDFLSSDQRGKVEGRLLVRD 180
           PIFIY NSLS+G SPI LWEDAKQQMVNE+ESWPYTFPASEDFLSSDQRGKVEGRLLVRD
Sbjct: 295 PIFIYLNSLSNGFSPIGLWEDAKQQMVNEVESWPYTFPASEDFLSSDQRGKVEGRLLVRD 354

Query: 181 RYSTSDAFIPVSGAYVGLAAPGDV 252
           RY  SDAFIPVSGAYVGLAA G+V
Sbjct: 355 RY-ISDAFIPVSGAYVGLAAIGEV 377


>ref|XP_003603707.1| Rhamnogalacturonate lyase [Medicago truncatula]
           gi|355492755|gb|AES73958.1| Rhamnogalacturonate lyase
           [Medicago truncatula]
          Length = 643

 Score =  148 bits (374), Expect = 4e-34
 Identities = 73/84 (86%), Positives = 75/84 (89%)
 Frame = +1

Query: 1   PIFIYFNSLSDGLSPINLWEDAKQQMVNEIESWPYTFPASEDFLSSDQRGKVEGRLLVRD 180
           PIFIY NS SDG SPI LWEDAKQQMVNE+ESWPYTFPASEDFLSS QRGK EGRLLVRD
Sbjct: 293 PIFIYLNSNSDGFSPIKLWEDAKQQMVNEVESWPYTFPASEDFLSSAQRGKFEGRLLVRD 352

Query: 181 RYSTSDAFIPVSGAYVGLAAPGDV 252
           RY   DAF+PVSGAYVGLAAPGDV
Sbjct: 353 RY-IRDAFVPVSGAYVGLAAPGDV 375


>ref|XP_002301112.1| predicted protein [Populus trichocarpa] gi|222842838|gb|EEE80385.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/84 (66%), Positives = 68/84 (80%)
 Frame = +1

Query: 1   PIFIYFNSLSDGLSPINLWEDAKQQMVNEIESWPYTFPASEDFLSSDQRGKVEGRLLVRD 180
           P+F+YFNS+ DG  P++LWEDAK QM+ E++SWPY FPASED+  SDQRG V GRLLVRD
Sbjct: 268 PVFMYFNSVMDGDDPLSLWEDAKLQMLIEVQSWPYGFPASEDYQKSDQRGNVSGRLLVRD 327

Query: 181 RYSTSDAFIPVSGAYVGLAAPGDV 252
           R+  SD + P +GAYVGLA PGDV
Sbjct: 328 RF-VSDDYTPANGAYVGLALPGDV 350


>ref|XP_002306520.1| predicted protein [Populus trichocarpa] gi|222855969|gb|EEE93516.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/84 (66%), Positives = 67/84 (79%)
 Frame = +1

Query: 1   PIFIYFNSLSDGLSPINLWEDAKQQMVNEIESWPYTFPASEDFLSSDQRGKVEGRLLVRD 180
           P+FIY NS S+G  P+ LWEDAK QM+ E++SWPY+FPASEDF  S+QRG V GRLLV+D
Sbjct: 268 PVFIYLNSASNGEDPLFLWEDAKMQMMAEVQSWPYSFPASEDFQKSEQRGNVCGRLLVKD 327

Query: 181 RYSTSDAFIPVSGAYVGLAAPGDV 252
           R + SD +I  SGAYVGLA PGDV
Sbjct: 328 R-NISDDYILASGAYVGLAPPGDV 350


>ref|XP_003526528.1| PREDICTED: rhamnogalacturonate lyase-like [Glycine max]
          Length = 636

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/83 (66%), Positives = 66/83 (79%)
 Frame = +1

Query: 1   PIFIYFNSLSDGLSPINLWEDAKQQMVNEIESWPYTFPASEDFLSSDQRGKVEGRLLVRD 180
           P++IY NS + G +P+ LWEDAK QM+NE++SWPY+FPASEDFL SDQRG V GRLLV D
Sbjct: 284 PVYIYLNSGAVGDNPLWLWEDAKIQMMNEVQSWPYSFPASEDFLKSDQRGNVSGRLLVLD 343

Query: 181 RYSTSDAFIPVSGAYVGLAAPGD 249
           RY  +D  IP + AYVGLA PGD
Sbjct: 344 RYVCTD-LIPANSAYVGLAPPGD 365


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