BLASTX nr result

ID: Glycyrrhiza24_contig00026452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026452
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531940.1| PREDICTED: actin-related protein 2/3 complex...   285   2e-75
ref|XP_003628965.1| Actin-related protein 2/3 complex subunit [M...   284   6e-75
gb|AFK40144.1| unknown [Lotus japonicus]                              276   9e-73
ref|XP_003547807.1| PREDICTED: actin-related protein 2/3 complex...   275   2e-72
gb|ACN34085.1| unknown [Zea mays]                                     259   2e-67

>ref|XP_003531940.1| PREDICTED: actin-related protein 2/3 complex subunit 2-like
           [Glycine max]
          Length = 324

 Score =  285 bits (730), Expect = 2e-75
 Identities = 141/146 (96%), Positives = 142/146 (97%)
 Frame = -2

Query: 440 VAPDMDPLVALVHRPKESFFLFPQADKVTVVYPMRFNDSIDIVLATSFLQEFVEARRTAG 261
           VA DMDPLVALVHRP ESFFLFPQADKVTVVYPMRFNDSIDIVLATSFLQEFVEARRTAG
Sbjct: 146 VALDMDPLVALVHRPNESFFLFPQADKVTVVYPMRFNDSIDIVLATSFLQEFVEARRTAG 205

Query: 260 LNNTPPCSWSLTPPLELKGVSADALSANAGFVSFVIFPRHVEGQKLDRTVWNLSTFHAYV 81
           LNNTPPCSWSLTPPLELK V ADALSANAGFV+FVIFPRHVEGQKLDRTVWNLSTFHAYV
Sbjct: 206 LNNTPPCSWSLTPPLELKEVPADALSANAGFVTFVIFPRHVEGQKLDRTVWNLSTFHAYV 265

Query: 80  SYHVKCSEGFMHTRMRRRVESLIQAL 3
           SYHVKCSEGFMHTRMRRRVESLIQAL
Sbjct: 266 SYHVKCSEGFMHTRMRRRVESLIQAL 291


>ref|XP_003628965.1| Actin-related protein 2/3 complex subunit [Medicago truncatula]
           gi|355522987|gb|AET03441.1| Actin-related protein 2/3
           complex subunit [Medicago truncatula]
          Length = 375

 Score =  284 bits (726), Expect = 6e-75
 Identities = 139/146 (95%), Positives = 142/146 (97%)
 Frame = -2

Query: 440 VAPDMDPLVALVHRPKESFFLFPQADKVTVVYPMRFNDSIDIVLATSFLQEFVEARRTAG 261
           VAPDMDPLVALVHRPKESFF+FPQADKVTV+YPMRFNDSIDIVLATSFLQEFVEARRTAG
Sbjct: 197 VAPDMDPLVALVHRPKESFFVFPQADKVTVMYPMRFNDSIDIVLATSFLQEFVEARRTAG 256

Query: 260 LNNTPPCSWSLTPPLELKGVSADALSANAGFVSFVIFPRHVEGQKLDRTVWNLSTFHAYV 81
           LNNTPPCSWS TPP ELKGVS DALSANAGFVSFVIFPRHVEG KLDRTVW+LSTFHAYV
Sbjct: 257 LNNTPPCSWSHTPPPELKGVSTDALSANAGFVSFVIFPRHVEGPKLDRTVWSLSTFHAYV 316

Query: 80  SYHVKCSEGFMHTRMRRRVESLIQAL 3
           SYHVKCSEGFMHTRMRRRVESLIQAL
Sbjct: 317 SYHVKCSEGFMHTRMRRRVESLIQAL 342


>gb|AFK40144.1| unknown [Lotus japonicus]
          Length = 324

 Score =  276 bits (707), Expect = 9e-73
 Identities = 135/146 (92%), Positives = 141/146 (96%)
 Frame = -2

Query: 440 VAPDMDPLVALVHRPKESFFLFPQADKVTVVYPMRFNDSIDIVLATSFLQEFVEARRTAG 261
           VAPDMDP+VALVHRPKESFFL PQADKVTVVYPMRFNDSID+VLATSFLQEFVEARRTAG
Sbjct: 146 VAPDMDPVVALVHRPKESFFLLPQADKVTVVYPMRFNDSIDMVLATSFLQEFVEARRTAG 205

Query: 260 LNNTPPCSWSLTPPLELKGVSADALSANAGFVSFVIFPRHVEGQKLDRTVWNLSTFHAYV 81
           L+NTPPCSWS TPPLELK + ADALSANAGFVSFVIFPRHVEG KLDRTVW+LSTFHAYV
Sbjct: 206 LSNTPPCSWSHTPPLELKELPADALSANAGFVSFVIFPRHVEGPKLDRTVWSLSTFHAYV 265

Query: 80  SYHVKCSEGFMHTRMRRRVESLIQAL 3
           SYHVKCSEGFMHTRMRRRVE+LIQAL
Sbjct: 266 SYHVKCSEGFMHTRMRRRVETLIQAL 291


>ref|XP_003547807.1| PREDICTED: actin-related protein 2/3 complex subunit 2 [Glycine
           max]
          Length = 320

 Score =  275 bits (704), Expect = 2e-72
 Identities = 137/146 (93%), Positives = 139/146 (95%)
 Frame = -2

Query: 440 VAPDMDPLVALVHRPKESFFLFPQADKVTVVYPMRFNDSIDIVLATSFLQEFVEARRTAG 261
           VAPD+DPLVALVHRP ESFFLFPQADKVTVVYPMRFNDSIDIVLATSFLQEFVEARRTAG
Sbjct: 146 VAPDLDPLVALVHRPNESFFLFPQADKVTVVYPMRFNDSIDIVLATSFLQEFVEARRTAG 205

Query: 260 LNNTPPCSWSLTPPLELKGVSADALSANAGFVSFVIFPRHVEGQKLDRTVWNLSTFHAYV 81
           LNNTPPCSWSLTPPLELK V A    ANAGFV+FVIFPRHVEGQKLDRTVWNLSTFHAYV
Sbjct: 206 LNNTPPCSWSLTPPLELKEVPA----ANAGFVTFVIFPRHVEGQKLDRTVWNLSTFHAYV 261

Query: 80  SYHVKCSEGFMHTRMRRRVESLIQAL 3
           SYHVKCSEGFMHTRMRRRVESLIQAL
Sbjct: 262 SYHVKCSEGFMHTRMRRRVESLIQAL 287


>gb|ACN34085.1| unknown [Zea mays]
          Length = 300

 Score =  259 bits (662), Expect = 2e-67
 Identities = 126/146 (86%), Positives = 135/146 (92%)
 Frame = -2

Query: 440 VAPDMDPLVALVHRPKESFFLFPQADKVTVVYPMRFNDSIDIVLATSFLQEFVEARRTAG 261
           VAP+++ LVALVHRP ESFFL PQADKVT+VYPMRF DSIDIVLATSFLQEFVEARRTA 
Sbjct: 123 VAPNVNNLVALVHRPNESFFLAPQADKVTIVYPMRFQDSIDIVLATSFLQEFVEARRTAA 182

Query: 260 LNNTPPCSWSLTPPLELKGVSADALSANAGFVSFVIFPRHVEGQKLDRTVWNLSTFHAYV 81
           LNN P C WS  PPLELKGVSADAL+ANAGFV+FV++PRHVEG+KLDRTVWNL TFHAYV
Sbjct: 183 LNNVPSCMWSPVPPLELKGVSADALNANAGFVTFVVYPRHVEGKKLDRTVWNLLTFHAYV 242

Query: 80  SYHVKCSEGFMHTRMRRRVESLIQAL 3
           SYHVKCSEGFMHTRMRRRVESLIQAL
Sbjct: 243 SYHVKCSEGFMHTRMRRRVESLIQAL 268


Top