BLASTX nr result

ID: Glycyrrhiza24_contig00026443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026443
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521842.1| PREDICTED: exportin-T-like [Glycine max]          220   8e-56
ref|XP_003554801.1| PREDICTED: exportin-T-like [Glycine max]          217   7e-55
ref|XP_002521319.1| Exportin-T, putative [Ricinus communis] gi|2...   187   8e-46
ref|XP_002888884.1| hypothetical protein ARALYDRAFT_476390 [Arab...   182   3e-44
ref|XP_002304132.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43

>ref|XP_003521842.1| PREDICTED: exportin-T-like [Glycine max]
          Length = 986

 Score =  220 bits (561), Expect = 8e-56
 Identities = 107/115 (93%), Positives = 110/115 (95%)
 Frame = -1

Query: 346 PDEKHMIRGSVFSIVCFEDKNLIRVLEGPAFIKNKLAQVLITLIYFEYPLIWSSVFVDFL 167
           PDE+HMIRGSVFSIVC EDKNL RVLEGPAFIKNKLAQVLITLIYFEYPL+WSSVFVDF 
Sbjct: 76  PDERHMIRGSVFSIVCLEDKNLTRVLEGPAFIKNKLAQVLITLIYFEYPLVWSSVFVDFF 135

Query: 166 PHLSKGNIVIDMFCRVLNALDDELISLDYHRTPEELTVAGRVKDAMRQQCVPQIV 2
           PHLSKGN+VIDMFCRVLNALDDELISLDY RTPEEL VAGRVKDAMRQQCVPQIV
Sbjct: 136 PHLSKGNVVIDMFCRVLNALDDELISLDYPRTPEELAVAGRVKDAMRQQCVPQIV 190


>ref|XP_003554801.1| PREDICTED: exportin-T-like [Glycine max]
          Length = 983

 Score =  217 bits (553), Expect = 7e-55
 Identities = 106/115 (92%), Positives = 110/115 (95%)
 Frame = -1

Query: 346 PDEKHMIRGSVFSIVCFEDKNLIRVLEGPAFIKNKLAQVLITLIYFEYPLIWSSVFVDFL 167
           PDE+HMIRGSVFSIVC EDKNL RVLEGPAFIKNKLAQVLITLIYFEYPL+WSSVFVDF 
Sbjct: 76  PDERHMIRGSVFSIVCLEDKNLTRVLEGPAFIKNKLAQVLITLIYFEYPLVWSSVFVDFF 135

Query: 166 PHLSKGNIVIDMFCRVLNALDDELISLDYHRTPEELTVAGRVKDAMRQQCVPQIV 2
           PHLSKGN+VIDMFCRVLNALDDELI+LDY RTPEELTVAGRVKDAMRQQCV QIV
Sbjct: 136 PHLSKGNVVIDMFCRVLNALDDELINLDYPRTPEELTVAGRVKDAMRQQCVCQIV 190


>ref|XP_002521319.1| Exportin-T, putative [Ricinus communis] gi|223539397|gb|EEF40987.1|
           Exportin-T, putative [Ricinus communis]
          Length = 988

 Score =  187 bits (475), Expect = 8e-46
 Identities = 96/117 (82%), Positives = 102/117 (87%), Gaps = 3/117 (2%)
 Frame = -1

Query: 343 DEKHMIRGSVFSIVCFE---DKNLIRVLEGPAFIKNKLAQVLITLIYFEYPLIWSSVFVD 173
           +EK  IR SVFS+ CF+   D N +R LEGPAFIKNKLAQVL+TLIYFEYPL+WSSV VD
Sbjct: 77  EEKDFIRKSVFSMCCFDVIDDGNAVRFLEGPAFIKNKLAQVLVTLIYFEYPLVWSSVIVD 136

Query: 172 FLPHLSKGNIVIDMFCRVLNALDDELISLDYHRTPEELTVAGRVKDAMRQQCVPQIV 2
           FLPHLSKG IVIDMFCRVLNALDDELISLDY RT EELTVAGRVKDAMRQQCV QIV
Sbjct: 137 FLPHLSKGAIVIDMFCRVLNALDDELISLDYPRTLEELTVAGRVKDAMRQQCVGQIV 193


>ref|XP_002888884.1| hypothetical protein ARALYDRAFT_476390 [Arabidopsis lyrata subsp.
           lyrata] gi|297334725|gb|EFH65143.1| hypothetical protein
           ARALYDRAFT_476390 [Arabidopsis lyrata subsp. lyrata]
          Length = 978

 Score =  182 bits (461), Expect = 3e-44
 Identities = 88/116 (75%), Positives = 102/116 (87%), Gaps = 3/116 (2%)
 Frame = -1

Query: 343 DEKHMIRGSVFSIVCFE---DKNLIRVLEGPAFIKNKLAQVLITLIYFEYPLIWSSVFVD 173
           DE+  +R SVFS+ C E   ++N +RV+EGP F+KNKLAQVL+TLIYF+YPLIWSSVFVD
Sbjct: 76  DEQSYVRKSVFSMACLEVIDNENAVRVVEGPPFVKNKLAQVLVTLIYFDYPLIWSSVFVD 135

Query: 172 FLPHLSKGNIVIDMFCRVLNALDDELISLDYHRTPEELTVAGRVKDAMRQQCVPQI 5
           F+PHLSKG +VIDMFCRVLNALDDELISLDY RT EE++VA RVKDAMRQQCVPQI
Sbjct: 136 FMPHLSKGAVVIDMFCRVLNALDDELISLDYPRTSEEISVAARVKDAMRQQCVPQI 191


>ref|XP_002304132.1| predicted protein [Populus trichocarpa] gi|222841564|gb|EEE79111.1|
           predicted protein [Populus trichocarpa]
          Length = 994

 Score =  179 bits (454), Expect = 2e-43
 Identities = 89/120 (74%), Positives = 102/120 (85%), Gaps = 6/120 (5%)
 Frame = -1

Query: 343 DEKHMIRGSVFSIVCFE-----DKNLIRVLEG-PAFIKNKLAQVLITLIYFEYPLIWSSV 182
           +EK  IR SVFS+ CFE     + N +R+LEG PAFIKNKLAQV +TL+YF+YPLIWSSV
Sbjct: 77  EEKDFIRKSVFSMCCFEVIDDKNNNAVRILEGAPAFIKNKLAQVFVTLVYFDYPLIWSSV 136

Query: 181 FVDFLPHLSKGNIVIDMFCRVLNALDDELISLDYHRTPEELTVAGRVKDAMRQQCVPQIV 2
           FVDFLPHL KG +VIDMFCR+LNALDDELISLDY RTPEE+ VAGRVKDA+RQQC+ QIV
Sbjct: 137 FVDFLPHLRKGAVVIDMFCRILNALDDELISLDYPRTPEEMGVAGRVKDAIRQQCIAQIV 196


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