BLASTX nr result

ID: Glycyrrhiza24_contig00026442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026442
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541227.1| PREDICTED: tryptophan synthase beta chain 2-...   276   2e-72
gb|ACU20365.1| unknown [Glycine max]                                  276   2e-72
ref|XP_004141606.1| PREDICTED: tryptophan synthase beta chain 2-...   213   2e-53
ref|XP_004141605.1| PREDICTED: tryptophan synthase beta chain 2-...   213   2e-53
ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-...   212   5e-53

>ref|XP_003541227.1| PREDICTED: tryptophan synthase beta chain 2-like [Glycine max]
          Length = 502

 Score =  276 bits (707), Expect = 2e-72
 Identities = 137/170 (80%), Positives = 148/170 (87%), Gaps = 1/170 (0%)
 Frame = +2

Query: 98  SLPTTSPCFYSKVEKQWPQRFALSVRPMH-LRLSNACKVRATLDANNNKSIGIPNQWYNL 274
           +LPT SPCF+SKV KQWPQ FALSVRP +  RLS+ACKVRATL A++ KSIGIPNQWYN+
Sbjct: 11  ALPTPSPCFHSKVGKQWPQGFALSVRPTNPKRLSSACKVRATLGASD-KSIGIPNQWYNV 69

Query: 275 IADXXXXXXXXXXXXTYQPIKPEDLSPLFPDELIRQEVTTDRFIDIPDEVLDVYKLWRPT 454
           IAD            TY+PIKP+DLSPLFPDELIRQE+ +DRFIDIPDEVLDVYKLWRPT
Sbjct: 70  IADLPVKPPPPLHPKTYEPIKPDDLSPLFPDELIRQEIASDRFIDIPDEVLDVYKLWRPT 129

Query: 455 PLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQAWYNLQEGVKN 604
           PLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQAWYNLQ GVKN
Sbjct: 130 PLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQAWYNLQAGVKN 179


>gb|ACU20365.1| unknown [Glycine max]
          Length = 238

 Score =  276 bits (707), Expect = 2e-72
 Identities = 137/170 (80%), Positives = 148/170 (87%), Gaps = 1/170 (0%)
 Frame = +2

Query: 98  SLPTTSPCFYSKVEKQWPQRFALSVRPMH-LRLSNACKVRATLDANNNKSIGIPNQWYNL 274
           +LPT SPCF+SKV KQWPQ FALSVRP +  RLS+ACKVRATL A++ KSIGIPNQWYN+
Sbjct: 11  ALPTPSPCFHSKVGKQWPQGFALSVRPTNPKRLSSACKVRATLGASD-KSIGIPNQWYNV 69

Query: 275 IADXXXXXXXXXXXXTYQPIKPEDLSPLFPDELIRQEVTTDRFIDIPDEVLDVYKLWRPT 454
           IAD            TY+PIKP+DLSPLFPDELIRQE+ +DRFIDIPDEVLDVYKLWRPT
Sbjct: 70  IADLPVKPPPPLHPKTYEPIKPDDLSPLFPDELIRQEIASDRFIDIPDEVLDVYKLWRPT 129

Query: 455 PLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQAWYNLQEGVKN 604
           PLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQAWYNLQ GVKN
Sbjct: 130 PLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQAWYNLQAGVKN 179


>ref|XP_004141606.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 600

 Score =  213 bits (543), Expect = 2e-53
 Identities = 102/155 (65%), Positives = 120/155 (77%)
 Frame = +2

Query: 140 KQWPQRFALSVRPMHLRLSNACKVRATLDANNNKSIGIPNQWYNLIADXXXXXXXXXXXX 319
           KQ P RF+L   P HLR SN  + +A  + N  KS+ +P QWYNL+AD            
Sbjct: 125 KQLPGRFSLKRTPRHLRFSNGYRTKAASNPNL-KSVEVPRQWYNLVADLPVKPPPPLHSK 183

Query: 320 TYQPIKPEDLSPLFPDELIRQEVTTDRFIDIPDEVLDVYKLWRPTPLIRAKRLEKLLDTP 499
           T +P+KPEDLS L+ DELI+QE +TDR+I+IPDEV+D+Y+LWRPTPLIRAKRLEKLLDTP
Sbjct: 184 TLEPLKPEDLSHLYADELIKQETSTDRYINIPDEVVDIYELWRPTPLIRAKRLEKLLDTP 243

Query: 500 ARIYYKYEGVSPAGSHKPNSAVPQAWYNLQEGVKN 604
           ARIYYKYEGVSP+GSHKPNSAVPQ WYN QEGVKN
Sbjct: 244 ARIYYKYEGVSPSGSHKPNSAVPQVWYNAQEGVKN 278


>ref|XP_004141605.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 482

 Score =  213 bits (542), Expect = 2e-53
 Identities = 104/157 (66%), Positives = 120/157 (76%)
 Frame = +2

Query: 134 VEKQWPQRFALSVRPMHLRLSNACKVRATLDANNNKSIGIPNQWYNLIADXXXXXXXXXX 313
           V +Q P   +L   P HLR SN  + +A  + N  KS+ +P QWYNL+AD          
Sbjct: 5   VGEQLPGCLSLKRVPAHLRFSNGYRTKAASNPNL-KSVEVPRQWYNLVADLPVKPPPPLH 63

Query: 314 XXTYQPIKPEDLSPLFPDELIRQEVTTDRFIDIPDEVLDVYKLWRPTPLIRAKRLEKLLD 493
             TY+PIKPEDLS LFPDELI+QE +T+R+I+IPDEV+D+Y LWRPTPLIRAKRLEKLLD
Sbjct: 64  PKTYEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYGLWRPTPLIRAKRLEKLLD 123

Query: 494 TPARIYYKYEGVSPAGSHKPNSAVPQAWYNLQEGVKN 604
           TPARIYYKYEGVSPAGSHKPNSAVPQ WYN QEGVKN
Sbjct: 124 TPARIYYKYEGVSPAGSHKPNSAVPQVWYNAQEGVKN 160


>ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 482

 Score =  212 bits (539), Expect = 5e-53
 Identities = 103/157 (65%), Positives = 120/157 (76%)
 Frame = +2

Query: 134 VEKQWPQRFALSVRPMHLRLSNACKVRATLDANNNKSIGIPNQWYNLIADXXXXXXXXXX 313
           V +Q P   +L   P HLR SN  + +A  + N  K++ +P QWYNL+AD          
Sbjct: 5   VGEQLPGCLSLKRVPAHLRFSNGYRTKAASNPNL-KAVEVPRQWYNLVADLPVKPPPPLH 63

Query: 314 XXTYQPIKPEDLSPLFPDELIRQEVTTDRFIDIPDEVLDVYKLWRPTPLIRAKRLEKLLD 493
             TY+PIKPEDLS LFPDELI+QE +T+R+I+IPDEV+D+Y LWRPTPLIRAKRLEKLLD
Sbjct: 64  PKTYEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYGLWRPTPLIRAKRLEKLLD 123

Query: 494 TPARIYYKYEGVSPAGSHKPNSAVPQAWYNLQEGVKN 604
           TPARIYYKYEGVSPAGSHKPNSAVPQ WYN QEGVKN
Sbjct: 124 TPARIYYKYEGVSPAGSHKPNSAVPQVWYNAQEGVKN 160


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