BLASTX nr result

ID: Glycyrrhiza24_contig00026440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026440
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637980.1| Protein transport protein SEC23 [Medicago tr...   170   2e-40
ref|XP_003551946.1| PREDICTED: protein transport protein SEC23-l...   160   2e-37
ref|XP_002311659.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_002315735.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_002284161.1| PREDICTED: protein transport protein sec23-l...   147   1e-33

>ref|XP_003637980.1| Protein transport protein SEC23 [Medicago truncatula]
           gi|358347970|ref|XP_003638023.1| Protein transport
           protein SEC23 [Medicago truncatula]
           gi|355503915|gb|AES85118.1| Protein transport protein
           SEC23 [Medicago truncatula] gi|355503958|gb|AES85161.1|
           Protein transport protein SEC23 [Medicago truncatula]
          Length = 746

 Score =  170 bits (430), Expect = 2e-40
 Identities = 88/115 (76%), Positives = 92/115 (80%)
 Frame = -1

Query: 399 MDFVELEAVEGLRXXXXXXXXXXXXXXXSELVIPLSIMCTPLMQQQGTEQLPLLPYDPLL 220
           MDFVELEAVEGLR                +L IPL+IMCTPL  Q GT+ LPLLPYDPLL
Sbjct: 1   MDFVELEAVEGLRWSWNSWPSTTKS----DLTIPLTIMCTPL-SQHGTD-LPLLPYDPLL 54

Query: 219 CTRCGAVLNPYARLDYQSRIWHCPFCSQRNPFPRSLLADTNLPAELFPTYTTVEY 55
           CTRCGAVLNPYARLDYQSRIWHCPFCSQRNPFPRS +AD NLPAELFPTYTTVEY
Sbjct: 55  CTRCGAVLNPYARLDYQSRIWHCPFCSQRNPFPRS-IADANLPAELFPTYTTVEY 108


>ref|XP_003551946.1| PREDICTED: protein transport protein SEC23-like [Glycine max]
          Length = 730

 Score =  160 bits (404), Expect = 2e-37
 Identities = 81/115 (70%), Positives = 88/115 (76%)
 Frame = -1

Query: 399 MDFVELEAVEGLRXXXXXXXXXXXXXXXSELVIPLSIMCTPLMQQQGTEQLPLLPYDPLL 220
           MD VELEAVEGLR                 ++IPLSIMCTPLM      ++PLLPYDPLL
Sbjct: 1   MDLVELEAVEGLRWAWNSWAADGT-----NMIIPLSIMCTPLMLLNS--EVPLLPYDPLL 53

Query: 219 CTRCGAVLNPYARLDYQSRIWHCPFCSQRNPFPRSLLADTNLPAELFPTYTTVEY 55
           C+RCGAVLNPYARLDYQSRIWHCPFCS RNPFPR  +ADTNLPAELFPTY+TVEY
Sbjct: 54  CSRCGAVLNPYARLDYQSRIWHCPFCSLRNPFPRP-IADTNLPAELFPTYSTVEY 107


>ref|XP_002311659.1| predicted protein [Populus trichocarpa] gi|222851479|gb|EEE89026.1|
           predicted protein [Populus trichocarpa]
          Length = 753

 Score =  149 bits (377), Expect = 2e-34
 Identities = 77/117 (65%), Positives = 85/117 (72%), Gaps = 2/117 (1%)
 Frame = -1

Query: 399 MDFVELEAVEGLRXXXXXXXXXXXXXXXSELVIPLSIMCTPLMQQQGTEQLPLLPYDPLL 220
           MDFVELEA+EGLR                 LVIPLSIMCTPLMQ   + +LP+L YDPL+
Sbjct: 1   MDFVELEAIEGLRWSWNAWPTTKNQVS--SLVIPLSIMCTPLMQ---STELPILTYDPLI 55

Query: 219 CTRCGAVLNPYARLDYQSRIWHCPFCSQRNPFPRSL--LADTNLPAELFPTYTTVEY 55
           CTRC AVLNPYAR+DYQSRIW CPFC  RNPFP S   + +TNLPAELFPTY TVEY
Sbjct: 56  CTRCAAVLNPYARVDYQSRIWVCPFCYNRNPFPISYSGIGETNLPAELFPTYNTVEY 112


>ref|XP_002315735.1| predicted protein [Populus trichocarpa] gi|222864775|gb|EEF01906.1|
           predicted protein [Populus trichocarpa]
          Length = 753

 Score =  149 bits (376), Expect = 3e-34
 Identities = 76/117 (64%), Positives = 86/117 (73%), Gaps = 2/117 (1%)
 Frame = -1

Query: 399 MDFVELEAVEGLRXXXXXXXXXXXXXXXSELVIPLSIMCTPLMQQQGTEQLPLLPYDPLL 220
           MDF+ELEA+EGLR                 L+IPLSIMCTPLMQ   + +LP+LPYDPL+
Sbjct: 1   MDFIELEAIEGLRWSWNAWPTTKNQVST--LIIPLSIMCTPLMQ---STELPILPYDPLI 55

Query: 219 CTRCGAVLNPYARLDYQSRIWHCPFCSQRNPFPRSLL--ADTNLPAELFPTYTTVEY 55
           CTRC AVLNPYAR+DYQSRIW CPFC  RN FP S L   +TNLPAELFPTY+TVEY
Sbjct: 56  CTRCAAVLNPYARVDYQSRIWVCPFCYNRNHFPISYLGIGETNLPAELFPTYSTVEY 112


>ref|XP_002284161.1| PREDICTED: protein transport protein sec23-like isoform 1 [Vitis
           vinifera]
          Length = 793

 Score =  147 bits (371), Expect = 1e-33
 Identities = 75/117 (64%), Positives = 86/117 (73%), Gaps = 2/117 (1%)
 Frame = -1

Query: 399 MDFVELEAVEGLRXXXXXXXXXXXXXXXSELVIPLSIMCTPLMQQQGTEQLPLLPYDPLL 220
           MDFVELE +EGLR                 LVIPLSIMCTPLMQ   + +LPLL YDPL+
Sbjct: 1   MDFVELETIEGLRWTWNSWPPFKPDASA--LVIPLSIMCTPLMQ---SSELPLLQYDPLI 55

Query: 219 CTRCGAVLNPYARLDYQSRIWHCPFCSQRNPFPRSL--LADTNLPAELFPTYTTVEY 55
           C+RCGAVLNPYAR++YQSRIW CPFC Q+N FPRS   + + NLPAELFPTY+TVEY
Sbjct: 56  CSRCGAVLNPYARVEYQSRIWVCPFCYQKNSFPRSYSGIGENNLPAELFPTYSTVEY 112


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