BLASTX nr result

ID: Glycyrrhiza24_contig00026439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026439
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542519.1| PREDICTED: diaminopimelate decarboxylase 1, ...   112   2e-23
ref|XP_003537297.1| PREDICTED: LOW QUALITY PROTEIN: diaminopimel...   101   5e-20
ref|NP_001241015.1| uncharacterized protein LOC100786832 [Glycin...    89   4e-16
ref|NP_001241982.1| uncharacterized protein LOC100809499 [Glycin...    83   3e-14
ref|XP_004148832.1| PREDICTED: diaminopimelate decarboxylase 2, ...    81   8e-14

>ref|XP_003542519.1| PREDICTED: diaminopimelate decarboxylase 1, chloroplastic-like
           [Glycine max]
          Length = 488

 Score =  112 bits (281), Expect = 2e-23
 Identities = 64/86 (74%), Positives = 68/86 (79%), Gaps = 4/86 (4%)
 Frame = -2

Query: 246 KTFKFNHPLNQNPFSQNLILPLKPTIKPSFNLRAVLSEKITAEPSLNES---TRFQ-CFT 79
           KTF  NHPLNQNP  QNLILPLK TIKP   LRAV S+KITA  SL+ S   TRFQ CFT
Sbjct: 15  KTF-INHPLNQNPSPQNLILPLKATIKPRV-LRAVHSQKITANSSLHNSDTRTRFQHCFT 72

Query: 78  KYEDGFLYCEGLKVHDIMESVERRPF 1
           K EDG LYCEGLKVH+IM+SVERRPF
Sbjct: 73  KSEDGLLYCEGLKVHEIMDSVERRPF 98


>ref|XP_003537297.1| PREDICTED: LOW QUALITY PROTEIN: diaminopimelate decarboxylase 2,
           chloroplastic-like [Glycine max]
          Length = 490

 Score =  101 bits (252), Expect = 5e-20
 Identities = 59/86 (68%), Positives = 65/86 (75%), Gaps = 4/86 (4%)
 Frame = -2

Query: 246 KTFKFNHPLNQNPFSQNLILPLKPTIKPSFNLRAVLSEKITAEPSLNES---TRFQ-CFT 79
           KTF  NH LNQNPF QNLILPLK TIKP   LR V S+KI A PSL++S   T F+  FT
Sbjct: 15  KTF-INHSLNQNPFPQNLILPLKATIKPRV-LRVVHSQKIIANPSLHDSDTKTHFRHYFT 72

Query: 78  KYEDGFLYCEGLKVHDIMESVERRPF 1
           K EDGFLYCEGLKVH+IM+SVER  F
Sbjct: 73  KSEDGFLYCEGLKVHEIMDSVERTHF 98


>ref|NP_001241015.1| uncharacterized protein LOC100786832 [Glycine max]
           gi|255636652|gb|ACU18663.1| unknown [Glycine max]
          Length = 488

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 53/85 (62%), Positives = 58/85 (68%), Gaps = 7/85 (8%)
 Frame = -2

Query: 234 FNHPLNQNPFSQNLILP---LKPTIKPSFNLRAVLSE---KITAEPSLNESTRFQ-CFTK 76
           +N+ LNQNP SQNL  P    K T KP   LRAVLS+   K   E + N    FQ CFTK
Sbjct: 17  YNYSLNQNPLSQNLFFPPLKFKSTTKPRV-LRAVLSQNAAKTAVEDTKN--AHFQHCFTK 73

Query: 75  YEDGFLYCEGLKVHDIMESVERRPF 1
            EDG+LYCEGLKVHDIMESVERRPF
Sbjct: 74  SEDGYLYCEGLKVHDIMESVERRPF 98


>ref|NP_001241982.1| uncharacterized protein LOC100809499 [Glycine max]
           gi|255671797|gb|ACU26531.1| diaminopimelate
           decarboxylase [Glycine max]
          Length = 488

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 53/85 (62%), Positives = 59/85 (69%), Gaps = 7/85 (8%)
 Frame = -2

Query: 234 FNHPLNQNPFSQNLI-LPLK--PTIKPSFNLRAVLSE---KITAEPSLNESTRFQ-CFTK 76
           ++H LNQN  SQ L  LPLK   T KP   LRAVLS+   K + E + N    FQ CFTK
Sbjct: 17  YSHSLNQNALSQKLFFLPLKFKATTKPRA-LRAVLSQNAVKTSVEDTKN--AHFQHCFTK 73

Query: 75  YEDGFLYCEGLKVHDIMESVERRPF 1
            EDG+LYCEGLKVHDIMESVERRPF
Sbjct: 74  SEDGYLYCEGLKVHDIMESVERRPF 98


>ref|XP_004148832.1| PREDICTED: diaminopimelate decarboxylase 2, chloroplastic-like
           [Cucumis sativus] gi|449524272|ref|XP_004169147.1|
           PREDICTED: diaminopimelate decarboxylase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 482

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/76 (52%), Positives = 51/76 (67%)
 Frame = -2

Query: 228 HPLNQNPFSQNLILPLKPTIKPSFNLRAVLSEKITAEPSLNESTRFQCFTKYEDGFLYCE 49
           H LN NPF +   LP KP +K   +L+AVLS+     PS  ++    CF+K  DGFLYCE
Sbjct: 21  HSLNSNPFHRIAFLPHKPFLKAPLSLKAVLSQN----PSKTQTQFQHCFSKSSDGFLYCE 76

Query: 48  GLKVHDIMESVERRPF 1
           G+KV DIMESV++RPF
Sbjct: 77  GIKVQDIMESVDKRPF 92


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