BLASTX nr result

ID: Glycyrrhiza24_contig00026436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026436
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein lig...   100   9e-20
gb|ABN06170.1| Regulator of chromosome condensation/beta-lactama...   100   1e-19
ref|XP_002510629.1| guanine nucleotide exchange factor P532, put...    94   1e-17
ref|XP_002331537.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_004166250.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    89   5e-16

>ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 444

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/54 (88%), Positives = 51/54 (94%)
 Frame = -2

Query: 266 NASDSQLGVPGLPEVQSSPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRES 105
           NA+DSQLG+PGLP VQS PVEVNFLMEDDGLGPHKVLS+A GASHAMCLALRES
Sbjct: 390 NANDSQLGIPGLPPVQSCPVEVNFLMEDDGLGPHKVLSVAIGASHAMCLALRES 443


>gb|ABN06170.1| Regulator of chromosome condensation/beta-lactamase-inhibitor
           protein II [Medicago truncatula]
          Length = 444

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/54 (90%), Positives = 50/54 (92%)
 Frame = -2

Query: 266 NASDSQLGVPGLPEVQSSPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRES 105
           NASDSQLGVPGLP +Q  PVEVNFLMEDDGLG HKVLSIANGASHAMCLALRES
Sbjct: 390 NASDSQLGVPGLPAIQPYPVEVNFLMEDDGLGSHKVLSIANGASHAMCLALRES 443


>ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis] gi|223551330|gb|EEF52816.1| guanine nucleotide
           exchange factor P532, putative [Ricinus communis]
          Length = 450

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/54 (85%), Positives = 47/54 (87%)
 Frame = -2

Query: 266 NASDSQLGVPGLPEVQSSPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALRES 105
           NA DSQLGVPGLPEVQ  PVEV FLMEDDGLGPHKVLS+A GASHAMCL LR S
Sbjct: 396 NAKDSQLGVPGLPEVQPCPVEVVFLMEDDGLGPHKVLSVAVGASHAMCLVLRTS 449


>ref|XP_002331537.1| predicted protein [Populus trichocarpa] gi|222873761|gb|EEF10892.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/52 (80%), Positives = 45/52 (86%)
 Frame = -2

Query: 266 NASDSQLGVPGLPEVQSSPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALR 111
           NA DSQLG+PGLPEVQS PVEV FLMEDDGLG H VLS++ GASHAMCL LR
Sbjct: 268 NAKDSQLGIPGLPEVQSCPVEVKFLMEDDGLGQHSVLSVSVGASHAMCLVLR 319


>ref|XP_004166250.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 463

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/52 (82%), Positives = 46/52 (88%)
 Frame = -2

Query: 266 NASDSQLGVPGLPEVQSSPVEVNFLMEDDGLGPHKVLSIANGASHAMCLALR 111
           NA DSQLGVPGLPEVQ+SPVEV FL EDDGLGP+ VLS+A GASHAMCL LR
Sbjct: 408 NAKDSQLGVPGLPEVQTSPVEVIFLTEDDGLGPYHVLSVAVGASHAMCLVLR 459


Top