BLASTX nr result

ID: Glycyrrhiza24_contig00026425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026425
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557011.1| PREDICTED: mitochondrial outer membrane prot...   183   1e-44
gb|ACU23163.1| unknown [Glycine max]                                  182   3e-44
ref|XP_003589068.1| Mitochondrial outer membrane protein porin, ...   177   6e-43
ref|XP_003550309.1| PREDICTED: LOW QUALITY PROTEIN: mitochondria...   163   1e-38
ref|XP_003632501.1| PREDICTED: outer plastidial membrane protein...   136   2e-30

>ref|XP_003557011.1| PREDICTED: mitochondrial outer membrane protein porin of 34
           kDa-like [Glycine max]
          Length = 277

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/108 (82%), Positives = 101/108 (93%)
 Frame = +3

Query: 6   MSAKGPGFFSDIGKKGRDILTKDYNSDQRFTISSSTNSGLDLNSTLAKSRGLSSGDVAVE 185
           MS KGPGFFS+IGK+GRDILTKDYNSDQRFTISSSTNSGLDL STL KSRGLSSGDVA E
Sbjct: 1   MSGKGPGFFSEIGKRGRDILTKDYNSDQRFTISSSTNSGLDLKSTLVKSRGLSSGDVAAE 60

Query: 186 FKHKNKTVHVKADTDSSVLTTFTVTDLAPSSKTIASIRIPDYNSGKIE 329
           FK+KNK V+VK DT+S+VLTTFTV+D+ PS+KTIASIR+PDY+SGK+E
Sbjct: 61  FKYKNKAVNVKVDTESNVLTTFTVSDVVPSAKTIASIRLPDYSSGKVE 108


>gb|ACU23163.1| unknown [Glycine max]
          Length = 277

 Score =  182 bits (461), Expect = 3e-44
 Identities = 89/108 (82%), Positives = 100/108 (92%)
 Frame = +3

Query: 6   MSAKGPGFFSDIGKKGRDILTKDYNSDQRFTISSSTNSGLDLNSTLAKSRGLSSGDVAVE 185
           MS KGPGFFS IGK+GRDILTKDYNSDQRFTISSSTNSGLDL STL KSRGLSSGDVA E
Sbjct: 1   MSGKGPGFFSAIGKRGRDILTKDYNSDQRFTISSSTNSGLDLKSTLVKSRGLSSGDVAAE 60

Query: 186 FKHKNKTVHVKADTDSSVLTTFTVTDLAPSSKTIASIRIPDYNSGKIE 329
           FK+KNK V+VK DT+S+VLTTFTV+D+ PS+KTIASIR+PDY+SGK+E
Sbjct: 61  FKYKNKAVNVKVDTESNVLTTFTVSDVVPSAKTIASIRLPDYSSGKVE 108


>ref|XP_003589068.1| Mitochondrial outer membrane protein porin, partial [Medicago
           truncatula] gi|355478116|gb|AES59319.1| Mitochondrial
           outer membrane protein porin, partial [Medicago
           truncatula]
          Length = 279

 Score =  177 bits (450), Expect = 6e-43
 Identities = 85/108 (78%), Positives = 95/108 (87%)
 Frame = +3

Query: 6   MSAKGPGFFSDIGKKGRDILTKDYNSDQRFTISSSTNSGLDLNSTLAKSRGLSSGDVAVE 185
           MS+KGPG FSDIGKK RDILTKDYNSDQ+ TISSSTNSGLDLNSTL KSRGLSSGDVA +
Sbjct: 1   MSSKGPGLFSDIGKKSRDILTKDYNSDQKLTISSSTNSGLDLNSTLLKSRGLSSGDVAAQ 60

Query: 186 FKHKNKTVHVKADTDSSVLTTFTVTDLAPSSKTIASIRIPDYNSGKIE 329
           FKH NKT+H K DTDS+VLTTF+ TD  PS+K +AS+R+PDY SGKIE
Sbjct: 61  FKHNNKTLHFKVDTDSTVLTTFSATDFVPSAKVLASVRLPDYKSGKIE 108


>ref|XP_003550309.1| PREDICTED: LOW QUALITY PROTEIN: mitochondrial outer membrane
           protein porin of 34 kDa-like [Glycine max]
          Length = 283

 Score =  163 bits (413), Expect = 1e-38
 Identities = 84/108 (77%), Positives = 92/108 (85%), Gaps = 1/108 (0%)
 Frame = +3

Query: 6   MSAKGPGFFSDIGKKGRDILTKDYNSDQRFTISSS-TNSGLDLNSTLAKSRGLSSGDVAV 182
           MS KGPG FS IGK GRDIL KDYNSDQRFT SSS TNSGLDL STL KSRGLSSGDVA 
Sbjct: 1   MSGKGPGLFSAIGKIGRDILMKDYNSDQRFTFSSSSTNSGLDLKSTLVKSRGLSSGDVAA 60

Query: 183 EFKHKNKTVHVKADTDSSVLTTFTVTDLAPSSKTIASIRIPDYNSGKI 326
            FK+KNK V+VK DT+S+VLTTFTV+D+ PS KTIA IR+PDYNSGK+
Sbjct: 61  AFKYKNKAVNVKVDTESNVLTTFTVSDVVPSVKTIALIRLPDYNSGKV 108


>ref|XP_003632501.1| PREDICTED: outer plastidial membrane protein porin-like [Vitis
           vinifera]
          Length = 142

 Score =  136 bits (342), Expect = 2e-30
 Identities = 61/106 (57%), Positives = 86/106 (81%)
 Frame = +3

Query: 12  AKGPGFFSDIGKKGRDILTKDYNSDQRFTISSSTNSGLDLNSTLAKSRGLSSGDVAVEFK 191
           +KGPG F+DIGKK +D+LT+DY SDQ+FT+S+ +++G+ + ST  K  GLS+GDVAV++K
Sbjct: 2   SKGPGLFADIGKKAKDLLTRDYISDQKFTVSTYSDTGVAITSTAVKKGGLSTGDVAVQYK 61

Query: 192 HKNKTVHVKADTDSSVLTTFTVTDLAPSSKTIASIRIPDYNSGKIE 329
           +KN  + VKADT S++ TT T T++ PS+KTIAS + PDYNSGK+E
Sbjct: 62  YKNSVIDVKADTGSNINTTLTFTEIIPSTKTIASFKFPDYNSGKLE 107


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