BLASTX nr result

ID: Glycyrrhiza24_contig00026409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026409
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003600535.1| hypothetical protein LCRIS_00063 [Lactobacil...   114   6e-24
ref|YP_005855168.1| hypothetical protein LC2W_0248 [Lactobacillu...    80   2e-13
emb|CAR86202.1| Conserved protein [Lactobacillus rhamnosus GG] g...    80   2e-13
ref|ZP_07758694.1| conserved domain protein [Enterococcus faecal...    54   7e-12
gb|ADI18134.1| hypothetical protein [uncultured Verrucomicrobial...    70   1e-10

>ref|YP_003600535.1| hypothetical protein LCRIS_00063 [Lactobacillus crispatus ST1]
           gi|295692304|ref|YP_003600914.1| hypothetical protein
           LCRIS_00442 [Lactobacillus crispatus ST1]
           gi|295692317|ref|YP_003600927.1| hypothetical protein
           LCRIS_00455 [Lactobacillus crispatus ST1]
           gi|295693512|ref|YP_003602122.1| hypothetical protein
           LCRIS_01650 [Lactobacillus crispatus ST1]
           gi|295030031|emb|CBL49510.1| conserved protein
           [Lactobacillus crispatus ST1]
           gi|295030410|emb|CBL49889.1| conserved protein
           [Lactobacillus crispatus ST1]
           gi|295030423|emb|CBL49902.1| conserved protein
           [Lactobacillus crispatus ST1]
           gi|295031618|emb|CBL51097.1| conserved protein
           [Lactobacillus crispatus ST1]
          Length = 156

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/71 (81%), Positives = 62/71 (87%)
 Frame = +2

Query: 44  VVWAVSLSTTDLITRSLTPEYKYMAFGVYLDSVTPDGPLVQTVLYLQNPNVDASPKAISE 223
           ++WAVSLSTTDLITRSLTP Y Y+ F VYLDSVTPDGPLVQT LYL  P  +ASPKAISE
Sbjct: 1   MIWAVSLSTTDLITRSLTPVYGYLEFVVYLDSVTPDGPLVQTELYLHYPLHEASPKAISE 60

Query: 224 RTSYLQVRLEF 256
           RTSYLQVRLEF
Sbjct: 61  RTSYLQVRLEF 71


>ref|YP_005855168.1| hypothetical protein LC2W_0248 [Lactobacillus casei LC2W]
           gi|385819441|ref|YP_005855828.1| hypothetical protein
           LC2W_0910 [Lactobacillus casei LC2W]
           gi|385819457|ref|YP_005855844.1| hypothetical protein
           LC2W_0926 [Lactobacillus casei LC2W]
           gi|385820535|ref|YP_005856922.1| hypothetical protein
           LC2W_2006 [Lactobacillus casei LC2W]
           gi|385821204|ref|YP_005857591.1| hypothetical protein
           LC2W_2677 [Lactobacillus casei LC2W]
           gi|385821956|ref|YP_005858298.1| hypothetical protein
           LCBD_0257 [Lactobacillus casei BD-II]
           gi|385822604|ref|YP_005858946.1| hypothetical protein
           LCBD_0907 [Lactobacillus casei BD-II]
           gi|385822619|ref|YP_005858961.1| hypothetical protein
           LCBD_0922 [Lactobacillus casei BD-II]
           gi|385823721|ref|YP_005860063.1| hypothetical protein
           LCBD_2026 [Lactobacillus casei BD-II]
           gi|385824397|ref|YP_005860739.1| hypothetical protein
           LCBD_2704 [Lactobacillus casei BD-II]
           gi|327381108|gb|AEA52584.1| Conserved protein
           [Lactobacillus casei LC2W] gi|327381768|gb|AEA53244.1|
           Conserved protein [Lactobacillus casei LC2W]
           gi|327381784|gb|AEA53260.1| Conserved protein
           [Lactobacillus casei LC2W] gi|327382862|gb|AEA54338.1|
           Conserved protein [Lactobacillus casei LC2W]
           gi|327383531|gb|AEA55007.1| Conserved protein
           [Lactobacillus casei LC2W] gi|327384283|gb|AEA55757.1|
           Conserved protein [Lactobacillus casei BD-II]
           gi|327384931|gb|AEA56405.1| Conserved protein
           [Lactobacillus casei BD-II] gi|327384946|gb|AEA56420.1|
           Conserved protein [Lactobacillus casei BD-II]
           gi|327386048|gb|AEA57522.1| Conserved protein
           [Lactobacillus casei BD-II] gi|327386724|gb|AEA58198.1|
           Conserved protein [Lactobacillus casei BD-II]
          Length = 131

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/48 (81%), Positives = 44/48 (91%)
 Frame = +2

Query: 113 MAFGVYLDSVTPDGPLVQTVLYLQNPNVDASPKAISERTSYLQVRLEF 256
           M FGVYL+SVT DGPLVQTVLYL +P+ +A+PKAISERTSYLQVRLEF
Sbjct: 1   MVFGVYLNSVTLDGPLVQTVLYLHDPSSEANPKAISERTSYLQVRLEF 48


>emb|CAR86202.1| Conserved protein [Lactobacillus rhamnosus GG]
           gi|257147740|emb|CAR86713.1| Conserved protein
           [Lactobacillus rhamnosus GG]
           gi|257147759|emb|CAR86732.1| Conserved protein
           [Lactobacillus rhamnosus GG]
           gi|257148810|emb|CAR87783.1| Conserved protein
           [Lactobacillus rhamnosus GG]
           gi|257149424|emb|CAR88397.1| Conserved protein
           [Lactobacillus rhamnosus GG]
           gi|257150160|emb|CAR89132.1| Conserved protein
           [Lactobacillus rhamnosus Lc 705]
           gi|257150679|emb|CAR89651.1| Conserved protein
           [Lactobacillus rhamnosus Lc 705]
           gi|257150698|emb|CAR89670.1| Conserved protein
           [Lactobacillus rhamnosus Lc 705]
           gi|257151737|emb|CAR90709.1| Conserved protein
           [Lactobacillus rhamnosus Lc 705]
           gi|257152374|emb|CAR91346.1| Conserved protein
           [Lactobacillus rhamnosus Lc 705]
          Length = 131

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 39/48 (81%), Positives = 44/48 (91%)
 Frame = +2

Query: 113 MAFGVYLDSVTPDGPLVQTVLYLQNPNVDASPKAISERTSYLQVRLEF 256
           M FGVYL+SVT DGPLVQTVLYL +P+ +A+PKAISERTSYLQVRLEF
Sbjct: 1   MVFGVYLNSVTLDGPLVQTVLYLHDPSSEANPKAISERTSYLQVRLEF 48


>ref|ZP_07758694.1| conserved domain protein [Enterococcus faecalis TX0470]
           gi|424726515|ref|ZP_18155178.1| hypothetical protein
           HMPREF1341_00374 [Enterococcus faecalis ERV81]
           gi|311293486|gb|EFQ72042.1| conserved domain protein
           [Enterococcus faecalis TX0470]
           gi|402399323|gb|EJV32201.1| hypothetical protein
           HMPREF1341_00374 [Enterococcus faecalis ERV81]
          Length = 63

 Score = 53.9 bits (128), Expect(2) = 7e-12
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = -2

Query: 173 ALFGLGARQGLLNPDKLRMPYIYIRESDCE 84
           ALFGLGA  GL N DKLRMP+IYIRESDCE
Sbjct: 34  ALFGLGAHLGLPNSDKLRMPFIYIRESDCE 63



 Score = 41.2 bits (95), Expect(2) = 7e-12
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = -3

Query: 256 KFQTNLEIAGSLRNSFRASVDV 191
           KFQTNLEIAGSLRNSFRAS+ +
Sbjct: 6   KFQTNLEIAGSLRNSFRASLGI 27


>gb|ADI18134.1| hypothetical protein [uncultured Verrucomicrobiales bacterium
           HF0200_39L05]
          Length = 76

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
 Frame = -3

Query: 235 IAGSLRNSFRASVDVRILEVEHCLD*GPVRGY*IQINSECHIFIF-GSQTASDKIRSRKG 59
           IAGSLRNSFRASV   +      +  G + GY  Q+NSEC    + GSQ+ASDKIR R+G
Sbjct: 2   IAGSLRNSFRASVGTVLRGGRALIGLGSLTGYQNQLNSECLGSHYPGSQSASDKIRRREG 61

Query: 58  NSPDHQLRSPN 26
           N+PDH+LR PN
Sbjct: 62  NNPDHRLRCPN 72


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