BLASTX nr result

ID: Glycyrrhiza24_contig00026404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026404
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_198359.1| uncharacterized protein [Arabidopsis thaliana] ...    64   5e-08
gb|ABK28719.1| unknown [Arabidopsis thaliana]                          64   5e-08
ref|XP_002515467.1| conserved hypothetical protein [Ricinus comm...    62   2e-07
ref|XP_002868405.1| hypothetical protein ARALYDRAFT_493584 [Arab...    59   1e-06

>ref|NP_198359.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10176808|dbj|BAB10016.1| unnamed protein product
           [Arabidopsis thaliana] gi|21593753|gb|AAM65720.1|
           unknown [Arabidopsis thaliana]
           gi|88900428|gb|ABD57526.1| At5g35090 [Arabidopsis
           thaliana] gi|91806926|gb|ABE66190.1| unknown
           [Arabidopsis thaliana] gi|332006546|gb|AED93929.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 159

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 47/136 (34%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
 Frame = +3

Query: 99  SLRDKLKSSIC---CF-TGSVHHHDPLEQGEGFYNKLHIPRTPISPAGSSTGGYSSWWLK 266
           SL+ KLKS  C   CF T + HHHD +           +P +P++   S+   +      
Sbjct: 10  SLQKKLKSRFCIAGCFRTTNHHHHDNIPDD--------LPSSPVTTEKSTQSPHGGGMKT 61

Query: 267 KSP--TGEYGNGGEPPRVRGRSLKSRMGXXXXXXXXXXXXXADFSYDPSSYALNFESESP 440
           KSP  T       E  +     +   +G             ADF YDPSSYALNF+    
Sbjct: 62  KSPRLTRTLSKSHEKCKSLIHRMGGGVGGVGGHGKHIRRHTADFHYDPSSYALNFDKGDE 121

Query: 441 EDD-ENFPLRNFSARL 485
           +D+ + FPLRNFSARL
Sbjct: 122 DDNIDRFPLRNFSARL 137


>gb|ABK28719.1| unknown [Arabidopsis thaliana]
          Length = 160

 Score = 63.9 bits (154), Expect = 5e-08
 Identities = 47/136 (34%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
 Frame = +3

Query: 99  SLRDKLKSSIC---CF-TGSVHHHDPLEQGEGFYNKLHIPRTPISPAGSSTGGYSSWWLK 266
           SL+ KLKS  C   CF T + HHHD +           +P +P++   S+   +      
Sbjct: 10  SLQKKLKSRFCIAGCFRTTNHHHHDNIPDD--------LPSSPVTTEKSTQSPHGGGMKT 61

Query: 267 KSP--TGEYGNGGEPPRVRGRSLKSRMGXXXXXXXXXXXXXADFSYDPSSYALNFESESP 440
           KSP  T       E  +     +   +G             ADF YDPSSYALNF+    
Sbjct: 62  KSPRLTRTLSKSHEKCKSLIHRMGGGVGGVGGHGKHIRRHTADFHYDPSSYALNFDKGDE 121

Query: 441 EDD-ENFPLRNFSARL 485
           +D+ + FPLRNFSARL
Sbjct: 122 DDNIDRFPLRNFSARL 137


>ref|XP_002515467.1| conserved hypothetical protein [Ricinus communis]
           gi|223545411|gb|EEF46916.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 133

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 49/129 (37%), Positives = 65/129 (50%)
 Frame = +3

Query: 99  SLRDKLKSSICCFTGSVHHHDPLEQGEGFYNKLHIPRTPISPAGSSTGGYSSWWLKKSPT 278
           SL+ KLKSSICCF  S HHH+ L   +    +L  PR+P +            WL KS  
Sbjct: 11  SLKHKLKSSICCFPSS-HHHETLGGSDDSRRQL-TPRSPYA------------WL-KSTA 55

Query: 279 GEYGNGGEPPRVRGRSLKSRMGXXXXXXXXXXXXXADFSYDPSSYALNFESESPEDDENF 458
            E+    +   + GR  K+R               ADF YD +SY+LNFE +  ++DE  
Sbjct: 56  QEFEIKEKCWGLIGRRGKNR----------RRHNSADFRYDAASYSLNFEDDIHKEDE-L 104

Query: 459 PLRNFSARL 485
           PL NF+ARL
Sbjct: 105 PLNNFTARL 113


>ref|XP_002868405.1| hypothetical protein ARALYDRAFT_493584 [Arabidopsis lyrata subsp.
           lyrata] gi|297314241|gb|EFH44664.1| hypothetical protein
           ARALYDRAFT_493584 [Arabidopsis lyrata subsp. lyrata]
          Length = 161

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 50/145 (34%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
 Frame = +3

Query: 99  SLRDKLKSSIC---CFTGSVHHHDPLEQGEGFYNKLHIPRTPISPAGSSTGGYSSWWLKK 269
           SL+ KLKS  C   CF  + HHH+  +          +P +P++PA +           +
Sbjct: 10  SLKKKLKSRFCIAGCFRTTNHHHNIPDD---------LPSSPMTPATTEKS-------TQ 53

Query: 270 SPTGEYGNGGEPPRVRG--------RSLKSRMGXXXXXXXXXXXXX----ADFSYDPSSY 413
           SP G       P   R         +SL  RMG                 ADF YDPSSY
Sbjct: 54  SPHGGEIKTKSPRLTRTLSKSHEKCKSLIHRMGGGVTGVGGHGKHIRRHTADFHYDPSSY 113

Query: 414 ALNFE-SESPEDDENFPLRNFSARL 485
           ALNF+  +  E+ + FPLRNFSARL
Sbjct: 114 ALNFDKGDEDENIDRFPLRNFSARL 138


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