BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026389
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...   555   e-156
ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I sub...   521   e-146
ref|XP_003518107.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   481   e-133
ref|XP_002308049.1| predicted protein [Populus trichocarpa] gi|2...   434   e-119
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   432   e-119

>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1628

 Score =  555 bits (1429), Expect = e-156
 Identities = 272/298 (91%), Positives = 285/298 (95%)
 Frame = -1

Query: 963  VEGDNIDPMTLQLNIEKRIRSNGEAALTYLDRKIISNLNSRTSSGVLKELLSEGILKPSG 784
            +E +NIDP+T+QLN+EK+IRSNGEAA+TYLDRK+ISNLNSRTSSGVLKELLS+G LKPSG
Sbjct: 835  MESENIDPITMQLNVEKKIRSNGEAAITYLDRKMISNLNSRTSSGVLKELLSKGSLKPSG 894

Query: 783  KNWISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFSPWDCSPRAGGF 604
            KNWISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCF  WDCSPRAGGF
Sbjct: 895  KNWISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFPSWDCSPRAGGF 954

Query: 603  IIDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVSYDHTVRDA 424
            IIDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLE LKV YDHTVRD+
Sbjct: 955  IIDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLESLKVCYDHTVRDS 1014

Query: 423  DGSIIQFHYGEDGVDVHQTSFITKFEALSTNKELVYSNCCRQLDRSSPYINKLPDALKGK 244
            DGSIIQFHYGEDGVDVHQTSFI KFEALS NKEL+YSNCCRQLDRSSPYINKLPDALKGK
Sbjct: 1015 DGSIIQFHYGEDGVDVHQTSFINKFEALSINKELIYSNCCRQLDRSSPYINKLPDALKGK 1074

Query: 243  AENFIRDFSLKHTNSGSMKRADFLKLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMT 70
            AENFIRDFS K  NS SMK ADFL++MEHKYVSSLAQPGEPVGVLASQSVGEPATQMT
Sbjct: 1075 AENFIRDFSSKQRNSSSMKEADFLQVMEHKYVSSLAQPGEPVGVLASQSVGEPATQMT 1132


>ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1653

 Score =  521 bits (1343), Expect = e-146
 Identities = 264/295 (89%), Positives = 276/295 (93%)
 Frame = -1

Query: 954  DNIDPMTLQLNIEKRIRSNGEAALTYLDRKIISNLNSRTSSGVLKELLSEGILKPSGKNW 775
            DNIDP+TLQLNIEK+IRSNGEAALT LDRK+ SNLNSRTSSG+LK+LLSEGILKPSGKN 
Sbjct: 858  DNIDPVTLQLNIEKKIRSNGEAALT-LDRKMTSNLNSRTSSGILKKLLSEGILKPSGKNC 916

Query: 774  ISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFSPWDCSPRAGGFIID 595
            ISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCF PWDCSPRAGGFIID
Sbjct: 917  ISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFIID 976

Query: 594  RFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVSYDHTVRDADGS 415
            RFLTAL PQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKV YDHTVRDADGS
Sbjct: 977  RFLTALHPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGS 1036

Query: 414  IIQFHYGEDGVDVHQTSFITKFEALSTNKELVYSNCCRQLDRSSPYINKLPDALKGKAEN 235
            IIQFHYGEDGVDVHQTSFIT+F ALSTNKELV+SN CRQLDRSSPYINKLP+AL+GKAE 
Sbjct: 1037 IIQFHYGEDGVDVHQTSFITEFGALSTNKELVFSNYCRQLDRSSPYINKLPEALEGKAEK 1096

Query: 234  FIRDFSLKHTNSGSMKRADFLKLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMT 70
            F      K  N GSM++ADFL+LMEHKYVS LAQPGEPVGVLASQSVGEPATQMT
Sbjct: 1097 F-----SKQRNLGSMEQADFLRLMEHKYVSCLAQPGEPVGVLASQSVGEPATQMT 1146


>ref|XP_003518107.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA190-like [Glycine max]
          Length = 1568

 Score =  481 bits (1238), Expect = e-133
 Identities = 248/298 (83%), Positives = 262/298 (87%), Gaps = 3/298 (1%)
 Frame = -1

Query: 954  DNIDPMTLQLNIEKRIRSNGEAALTYLDRKIISNLNSRTSSGVLKELLSEGILKPSGKNW 775
            DNID +TLQLNIEK+IRSNGEA LT  DRK+ + LNS TSSG+LKELLSEGIL+PSGKN 
Sbjct: 800  DNIDSVTLQLNIEKKIRSNGEATLTS-DRKMTNKLNSTTSSGILKELLSEGILQPSGKNC 858

Query: 774  ISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFSPWDCSPRAGGFIID 595
            ISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCF PWDCSPRAGGFIID
Sbjct: 859  ISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFPPWDCSPRAGGFIID 918

Query: 594  RFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVSYDHTVRDADGS 415
            RFLTAL PQEYYFHCMAG EGLVDTAVKTSRSGYLQRCLMKNLECLKV YDHTVRDADGS
Sbjct: 919  RFLTALHPQEYYFHCMAGCEGLVDTAVKTSRSGYLQRCLMKNLECLKVCYDHTVRDADGS 978

Query: 414  IIQFHYGEDGVDVHQTS--FITKFEA-LSTNKELVYSNCCRQLDRSSPYINKLPDALKGK 244
            IIQFHYGEDGVDVHQT   F+   +  +  NKELVYSN CRQLDRSSPYINKLPDAL+GK
Sbjct: 979  IIQFHYGEDGVDVHQTCLFFLENHKLHIQLNKELVYSNYCRQLDRSSPYINKLPDALEGK 1038

Query: 243  AENFIRDFSLKHTNSGSMKRADFLKLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMT 70
            AE F      K  N GSM+ ADF++L+EHKYVS L QPGEPVGVLASQSVGEPATQMT
Sbjct: 1039 AEKF-----SKQRNLGSMEHADFVRLIEHKYVSCLTQPGEPVGVLASQSVGEPATQMT 1091


>ref|XP_002308049.1| predicted protein [Populus trichocarpa] gi|222854025|gb|EEE91572.1|
            predicted protein [Populus trichocarpa]
          Length = 1168

 Score =  434 bits (1115), Expect = e-119
 Identities = 217/305 (71%), Positives = 254/305 (83%), Gaps = 8/305 (2%)
 Frame = -1

Query: 960  EGDNIDPMTLQLNIEKRIRSNGEAALTYLDRKIISNLNSRTSSGVLKELLSEGILKPSGK 781
            E   IDP+ LQ NIEK IRS+GE+ALTYLDR++ + LNS+TSSGV+ ELLSEG+LKPSGK
Sbjct: 865  ENIKIDPLELQSNIEKTIRSDGESALTYLDRQMTNELNSKTSSGVINELLSEGLLKPSGK 924

Query: 780  NWISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFSPWDCSPRAGGFI 601
            N ISLMTTSGAKGS VNFQQISS LGQQELEGKRVPRMVSGKTLPCF PWD + RAGG+I
Sbjct: 925  NCISLMTTSGAKGSKVNFQQISSFLGQQELEGKRVPRMVSGKTLPCFHPWDWAARAGGYI 984

Query: 600  IDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVSYDHTVRDAD 421
            IDRFLT LRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLECL++ YDHTVRDAD
Sbjct: 985  IDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLECLRIGYDHTVRDAD 1044

Query: 420  GSIIQFHYGEDGVDVHQTSFITKFEALSTNKELVYSNCCRQLDRSSPYINKLPDALKGKA 241
            GSI+QF+YGEDGVDVHQT FI KFEAL+ N+E++Y     +L   + YI++LP ALK KA
Sbjct: 1045 GSIVQFYYGEDGVDVHQTGFIAKFEALAANREIIYEK-SDELGTCNAYISELPKALKEKA 1103

Query: 240  ENFIRDFSLKHTN--------SGSMKRADFLKLMEHKYVSSLAQPGEPVGVLASQSVGEP 85
            E F+R  + + ++        S ++   DF KL++ K+ +SLAQPGEPVGVLA+QSVGEP
Sbjct: 1104 ETFLRKIAKEQSSLHDPTKDRSSNLVEHDFYKLLKQKFFTSLAQPGEPVGVLAAQSVGEP 1163

Query: 84   ATQMT 70
            +TQMT
Sbjct: 1164 STQMT 1168


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  432 bits (1112), Expect = e-119
 Identities = 217/298 (72%), Positives = 253/298 (84%), Gaps = 1/298 (0%)
 Frame = -1

Query: 960  EGDNIDPMTLQLNIEKRIRSNGEAALTYLDRKIISNLNSRT-SSGVLKELLSEGILKPSG 784
            +G+ +DPMTLQLNIEK I  NGEAALT LDRK+ S LN RT +S VLK+LLSEG+LKPS 
Sbjct: 852  DGEKLDPMTLQLNIEKTISYNGEAALTSLDRKMTSQLNERTGNSKVLKDLLSEGLLKPSV 911

Query: 783  KNWISLMTTSGAKGSMVNFQQISSHLGQQELEGKRVPRMVSGKTLPCFSPWDCSPRAGGF 604
            KN ISLMTTSGAKG   NFQQISSHLGQQ+LEGKRVPRMVSGKTLPCF PWD + RAGGF
Sbjct: 912  KNCISLMTTSGAKGGTANFQQISSHLGQQQLEGKRVPRMVSGKTLPCFPPWDWASRAGGF 971

Query: 603  IIDRFLTALRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLMKNLECLKVSYDHTVRDA 424
            I+DRFLT LRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCL+KNLE LK+ YDHTVRDA
Sbjct: 972  IVDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKICYDHTVRDA 1031

Query: 423  DGSIIQFHYGEDGVDVHQTSFITKFEALSTNKELVYSNCCRQLDRSSPYINKLPDALKGK 244
            DGS+IQF YGEDGVDVH+T+FITKFEAL+ N++++Y N   QL + + +IN+LP AL+ K
Sbjct: 1032 DGSVIQFQYGEDGVDVHKTAFITKFEALAANQDMLYENSHHQLGKYNVFINELPSALREK 1091

Query: 243  AENFIRDFSLKHTNSGSMKRADFLKLMEHKYVSSLAQPGEPVGVLASQSVGEPATQMT 70
             E FI +   K    G + + DF++L+E+KY+SSLAQPGEPVGVLA+QS+GEP+TQMT
Sbjct: 1092 GE-FIYNSLSKDKVPGLVLKEDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMT 1148