BLASTX nr result
ID: Glycyrrhiza24_contig00026379
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00026379 (472 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-... 175 2e-64 ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 165 8e-62 ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-... 156 2e-59 emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera] 156 2e-59 ref|XP_003522362.1| PREDICTED: LOW QUALITY PROTEIN: replication ... 165 2e-59 >ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like [Glycine max] Length = 894 Score = 175 bits (444), Expect(2) = 2e-64 Identities = 84/103 (81%), Positives = 94/103 (91%) Frame = +2 Query: 5 RVTCFNAVADQFYNVVEPSKVYLVSRGSIKPAQKNFNHLPNDQEITLDITSIIQPCPEDD 184 R TCFNAVADQFYNV+E KVYL+SRGSIKPAQKNFNHL NDQE+TLD+ SIIQPC +D+ Sbjct: 301 RATCFNAVADQFYNVIEAGKVYLISRGSIKPAQKNFNHLRNDQELTLDVASIIQPCLDDN 360 Query: 185 TSIPKQTFNFRPISEIESMENNSILDVIAVVSSISPTASIMRK 313 SIP QTFN+RPISEIES+ENNSI+DVI VV+SISPTASIMRK Sbjct: 361 DSIPSQTFNYRPISEIESLENNSIVDVIGVVTSISPTASIMRK 403 Score = 95.5 bits (236), Expect(2) = 2e-64 Identities = 45/53 (84%), Positives = 47/53 (88%) Frame = +3 Query: 312 KNGTETQKRTLQLKDMSGRSVELTLWGSFCNAEGQRLQSICDTGTFPVLAVKA 470 KNGTE QKRTLQLKDMSGRSVELTLWG+FC EGQRLQ+ICD G FPVLA KA Sbjct: 403 KNGTEVQKRTLQLKDMSGRSVELTLWGNFCIVEGQRLQTICDAGEFPVLATKA 455 >ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago truncatula] gi|355513943|gb|AES95566.1| Replication protein A 70 kDa DNA-binding subunit [Medicago truncatula] Length = 1723 Score = 165 bits (418), Expect(2) = 8e-62 Identities = 81/103 (78%), Positives = 93/103 (90%) Frame = +2 Query: 5 RVTCFNAVADQFYNVVEPSKVYLVSRGSIKPAQKNFNHLPNDQEITLDITSIIQPCPEDD 184 R TCFN VA+QFYNV+E KVYLVSRGS+KPAQKNFNHLPNDQEITLDITS+IQPC DD Sbjct: 320 RATCFNTVAEQFYNVIEVGKVYLVSRGSLKPAQKNFNHLPNDQEITLDITSVIQPC-VDD 378 Query: 185 TSIPKQTFNFRPISEIESMENNSILDVIAVVSSISPTASIMRK 313 SI +Q +NFRPI +IE+M+NNSI+DVIAVV+SISPTASI+RK Sbjct: 379 NSILQQIYNFRPIGDIENMQNNSIVDVIAVVTSISPTASIIRK 421 Score = 97.1 bits (240), Expect(2) = 8e-62 Identities = 43/53 (81%), Positives = 50/53 (94%) Frame = +3 Query: 312 KNGTETQKRTLQLKDMSGRSVELTLWGSFCNAEGQRLQSICDTGTFPVLAVKA 470 KNGTETQKR+LQLKDMSGRSVELT+WGSFCN EGQ+LQ+ICD+G FP+L VK+ Sbjct: 421 KNGTETQKRSLQLKDMSGRSVELTVWGSFCNTEGQKLQNICDSGEFPILVVKS 473 >ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like [Vitis vinifera] Length = 882 Score = 156 bits (394), Expect(2) = 2e-59 Identities = 75/103 (72%), Positives = 88/103 (85%) Frame = +2 Query: 5 RVTCFNAVADQFYNVVEPSKVYLVSRGSIKPAQKNFNHLPNDQEITLDITSIIQPCPEDD 184 RVTCFNAVADQFYN +E KVYL+S+GS+KPAQK FNHL ND EI L+ TS IQPC +DD Sbjct: 321 RVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLRNDHEIFLESTSTIQPCFDDD 380 Query: 185 TSIPKQTFNFRPISEIESMENNSILDVIAVVSSISPTASIMRK 313 SIP+Q F+FR IS++ESMENNS++DVI VVS ISP+ASIMRK Sbjct: 381 NSIPRQQFHFRSISDVESMENNSVVDVIGVVSFISPSASIMRK 423 Score = 98.6 bits (244), Expect(2) = 2e-59 Identities = 45/53 (84%), Positives = 50/53 (94%) Frame = +3 Query: 312 KNGTETQKRTLQLKDMSGRSVELTLWGSFCNAEGQRLQSICDTGTFPVLAVKA 470 KNGTETQKR L LKDMSGRSVELTLWG+FCNAEGQRLQ++CD+G FPVLAVK+ Sbjct: 423 KNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKS 475 >emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera] Length = 882 Score = 156 bits (394), Expect(2) = 2e-59 Identities = 75/103 (72%), Positives = 88/103 (85%) Frame = +2 Query: 5 RVTCFNAVADQFYNVVEPSKVYLVSRGSIKPAQKNFNHLPNDQEITLDITSIIQPCPEDD 184 RVTCFNAVADQFYN +E KVYL+S+GS+KPAQK FNHL ND EI L+ TS IQPC +DD Sbjct: 321 RVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLRNDHEIFLESTSTIQPCFDDD 380 Query: 185 TSIPKQTFNFRPISEIESMENNSILDVIAVVSSISPTASIMRK 313 SIP+Q F+FR IS++ESMENNS++DVI VVS ISP+ASIMRK Sbjct: 381 NSIPRQQFHFRXISDVESMENNSVVDVIGVVSFISPSASIMRK 423 Score = 98.6 bits (244), Expect(2) = 2e-59 Identities = 45/53 (84%), Positives = 50/53 (94%) Frame = +3 Query: 312 KNGTETQKRTLQLKDMSGRSVELTLWGSFCNAEGQRLQSICDTGTFPVLAVKA 470 KNGTETQKR L LKDMSGRSVELTLWG+FCNAEGQRLQ++CD+G FPVLAVK+ Sbjct: 423 KNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKS 475 >ref|XP_003522362.1| PREDICTED: LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit-like [Glycine max] Length = 586 Score = 165 bits (418), Expect(2) = 2e-59 Identities = 78/103 (75%), Positives = 89/103 (86%) Frame = +2 Query: 5 RVTCFNAVADQFYNVVEPSKVYLVSRGSIKPAQKNFNHLPNDQEITLDITSIIQPCPEDD 184 R TCFN VADQFYNV+E KVYL+ RGSIKP QKNFNHLPNDQE+TLD+ SIIQPC +D+ Sbjct: 243 RATCFNVVADQFYNVIEAGKVYLIFRGSIKPTQKNFNHLPNDQELTLDVASIIQPCLDDN 302 Query: 185 TSIPKQTFNFRPISEIESMENNSILDVIAVVSSISPTASIMRK 313 SI QTFN+RPISEIES+ENN+I+DVI VV+SISP SIMRK Sbjct: 303 DSITSQTFNYRPISEIESLENNNIVDVIGVVTSISPKTSIMRK 345 Score = 89.0 bits (219), Expect(2) = 2e-59 Identities = 44/53 (83%), Positives = 45/53 (84%) Frame = +3 Query: 312 KNGTETQKRTLQLKDMSGRSVELTLWGSFCNAEGQRLQSICDTGTFPVLAVKA 470 KNGTE QKRTLQLKDMSGRSVELTL G+FC EGQ LQSICD G FPVLA KA Sbjct: 345 KNGTEVQKRTLQLKDMSGRSVELTLRGNFCIVEGQMLQSICDVGEFPVLATKA 397