BLASTX nr result

ID: Glycyrrhiza24_contig00026379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026379
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-...   175   2e-64
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   165   8e-62
ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-...   156   2e-59
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]   156   2e-59
ref|XP_003522362.1| PREDICTED: LOW QUALITY PROTEIN: replication ...   165   2e-59

>ref|XP_003533460.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 894

 Score =  175 bits (444), Expect(2) = 2e-64
 Identities = 84/103 (81%), Positives = 94/103 (91%)
 Frame = +2

Query: 5   RVTCFNAVADQFYNVVEPSKVYLVSRGSIKPAQKNFNHLPNDQEITLDITSIIQPCPEDD 184
           R TCFNAVADQFYNV+E  KVYL+SRGSIKPAQKNFNHL NDQE+TLD+ SIIQPC +D+
Sbjct: 301 RATCFNAVADQFYNVIEAGKVYLISRGSIKPAQKNFNHLRNDQELTLDVASIIQPCLDDN 360

Query: 185 TSIPKQTFNFRPISEIESMENNSILDVIAVVSSISPTASIMRK 313
            SIP QTFN+RPISEIES+ENNSI+DVI VV+SISPTASIMRK
Sbjct: 361 DSIPSQTFNYRPISEIESLENNSIVDVIGVVTSISPTASIMRK 403



 Score = 95.5 bits (236), Expect(2) = 2e-64
 Identities = 45/53 (84%), Positives = 47/53 (88%)
 Frame = +3

Query: 312 KNGTETQKRTLQLKDMSGRSVELTLWGSFCNAEGQRLQSICDTGTFPVLAVKA 470
           KNGTE QKRTLQLKDMSGRSVELTLWG+FC  EGQRLQ+ICD G FPVLA KA
Sbjct: 403 KNGTEVQKRTLQLKDMSGRSVELTLWGNFCIVEGQRLQTICDAGEFPVLATKA 455


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355513943|gb|AES95566.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 1723

 Score =  165 bits (418), Expect(2) = 8e-62
 Identities = 81/103 (78%), Positives = 93/103 (90%)
 Frame = +2

Query: 5   RVTCFNAVADQFYNVVEPSKVYLVSRGSIKPAQKNFNHLPNDQEITLDITSIIQPCPEDD 184
           R TCFN VA+QFYNV+E  KVYLVSRGS+KPAQKNFNHLPNDQEITLDITS+IQPC  DD
Sbjct: 320 RATCFNTVAEQFYNVIEVGKVYLVSRGSLKPAQKNFNHLPNDQEITLDITSVIQPC-VDD 378

Query: 185 TSIPKQTFNFRPISEIESMENNSILDVIAVVSSISPTASIMRK 313
            SI +Q +NFRPI +IE+M+NNSI+DVIAVV+SISPTASI+RK
Sbjct: 379 NSILQQIYNFRPIGDIENMQNNSIVDVIAVVTSISPTASIIRK 421



 Score = 97.1 bits (240), Expect(2) = 8e-62
 Identities = 43/53 (81%), Positives = 50/53 (94%)
 Frame = +3

Query: 312 KNGTETQKRTLQLKDMSGRSVELTLWGSFCNAEGQRLQSICDTGTFPVLAVKA 470
           KNGTETQKR+LQLKDMSGRSVELT+WGSFCN EGQ+LQ+ICD+G FP+L VK+
Sbjct: 421 KNGTETQKRSLQLKDMSGRSVELTVWGSFCNTEGQKLQNICDSGEFPILVVKS 473


>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Vitis vinifera]
          Length = 882

 Score =  156 bits (394), Expect(2) = 2e-59
 Identities = 75/103 (72%), Positives = 88/103 (85%)
 Frame = +2

Query: 5   RVTCFNAVADQFYNVVEPSKVYLVSRGSIKPAQKNFNHLPNDQEITLDITSIIQPCPEDD 184
           RVTCFNAVADQFYN +E  KVYL+S+GS+KPAQK FNHL ND EI L+ TS IQPC +DD
Sbjct: 321 RVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLRNDHEIFLESTSTIQPCFDDD 380

Query: 185 TSIPKQTFNFRPISEIESMENNSILDVIAVVSSISPTASIMRK 313
            SIP+Q F+FR IS++ESMENNS++DVI VVS ISP+ASIMRK
Sbjct: 381 NSIPRQQFHFRSISDVESMENNSVVDVIGVVSFISPSASIMRK 423



 Score = 98.6 bits (244), Expect(2) = 2e-59
 Identities = 45/53 (84%), Positives = 50/53 (94%)
 Frame = +3

Query: 312 KNGTETQKRTLQLKDMSGRSVELTLWGSFCNAEGQRLQSICDTGTFPVLAVKA 470
           KNGTETQKR L LKDMSGRSVELTLWG+FCNAEGQRLQ++CD+G FPVLAVK+
Sbjct: 423 KNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKS 475


>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
          Length = 882

 Score =  156 bits (394), Expect(2) = 2e-59
 Identities = 75/103 (72%), Positives = 88/103 (85%)
 Frame = +2

Query: 5   RVTCFNAVADQFYNVVEPSKVYLVSRGSIKPAQKNFNHLPNDQEITLDITSIIQPCPEDD 184
           RVTCFNAVADQFYN +E  KVYL+S+GS+KPAQK FNHL ND EI L+ TS IQPC +DD
Sbjct: 321 RVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLRNDHEIFLESTSTIQPCFDDD 380

Query: 185 TSIPKQTFNFRPISEIESMENNSILDVIAVVSSISPTASIMRK 313
            SIP+Q F+FR IS++ESMENNS++DVI VVS ISP+ASIMRK
Sbjct: 381 NSIPRQQFHFRXISDVESMENNSVVDVIGVVSFISPSASIMRK 423



 Score = 98.6 bits (244), Expect(2) = 2e-59
 Identities = 45/53 (84%), Positives = 50/53 (94%)
 Frame = +3

Query: 312 KNGTETQKRTLQLKDMSGRSVELTLWGSFCNAEGQRLQSICDTGTFPVLAVKA 470
           KNGTETQKR L LKDMSGRSVELTLWG+FCNAEGQRLQ++CD+G FPVLAVK+
Sbjct: 423 KNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKS 475


>ref|XP_003522362.1| PREDICTED: LOW QUALITY PROTEIN: replication protein A 70 kDa
           DNA-binding subunit-like [Glycine max]
          Length = 586

 Score =  165 bits (418), Expect(2) = 2e-59
 Identities = 78/103 (75%), Positives = 89/103 (86%)
 Frame = +2

Query: 5   RVTCFNAVADQFYNVVEPSKVYLVSRGSIKPAQKNFNHLPNDQEITLDITSIIQPCPEDD 184
           R TCFN VADQFYNV+E  KVYL+ RGSIKP QKNFNHLPNDQE+TLD+ SIIQPC +D+
Sbjct: 243 RATCFNVVADQFYNVIEAGKVYLIFRGSIKPTQKNFNHLPNDQELTLDVASIIQPCLDDN 302

Query: 185 TSIPKQTFNFRPISEIESMENNSILDVIAVVSSISPTASIMRK 313
            SI  QTFN+RPISEIES+ENN+I+DVI VV+SISP  SIMRK
Sbjct: 303 DSITSQTFNYRPISEIESLENNNIVDVIGVVTSISPKTSIMRK 345



 Score = 89.0 bits (219), Expect(2) = 2e-59
 Identities = 44/53 (83%), Positives = 45/53 (84%)
 Frame = +3

Query: 312 KNGTETQKRTLQLKDMSGRSVELTLWGSFCNAEGQRLQSICDTGTFPVLAVKA 470
           KNGTE QKRTLQLKDMSGRSVELTL G+FC  EGQ LQSICD G FPVLA KA
Sbjct: 345 KNGTEVQKRTLQLKDMSGRSVELTLRGNFCIVEGQMLQSICDVGEFPVLATKA 397


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