BLASTX nr result

ID: Glycyrrhiza24_contig00026357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026357
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|1...   130   4e-28
ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability ...   127   2e-27
ref|XP_003538189.1| PREDICTED: recQ-mediated genome instability ...   126   5e-27
ref|NP_172315.1| uncharacterized protein [Arabidopsis thaliana] ...   125   9e-27
ref|XP_002889690.1| hypothetical protein ARALYDRAFT_470900 [Arab...   122   1e-25

>ref|XP_002328082.1| predicted protein [Populus trichocarpa] gi|118483555|gb|ABK93675.1|
           unknown [Populus trichocarpa]
           gi|222837597|gb|EEE75962.1| predicted protein [Populus
           trichocarpa]
          Length = 134

 Score =  130 bits (326), Expect = 4e-28
 Identities = 73/136 (53%), Positives = 77/136 (56%)
 Frame = +1

Query: 22  MDYSXXXXXXXXXXXXHAREVPSQNSFTLGGILFQRAWLQXXXXXXXXXXXXXXXXXXXX 201
           MDYS             A E PSQN+ TLGGILFQRAWLQ                    
Sbjct: 1   MDYSLAALKLLCVQLKDASETPSQNALTLGGILFQRAWLQGILVSNDGDGRLLLDDGTGV 60

Query: 202 XXXIELSLSGDFRLRQWKIXXXXXXXXXXXARAGEPPMIKVHKIVDLSSSPDREAMWYLE 381
              IEL LS DFRLR W              R GE PMIKVHK+VDLS+ PDREAMWYLE
Sbjct: 61  ---IELCLSPDFRLRHWDSGMYVMVVGGYFVRHGETPMIKVHKMVDLSAFPDREAMWYLE 117

Query: 382 VMEAYKLFYQPLVEEF 429
           VMEAYKLFYQPL+EEF
Sbjct: 118 VMEAYKLFYQPLIEEF 133


>ref|XP_002271178.1| PREDICTED: recQ-mediated genome instability protein 2 [Vitis
           vinifera] gi|297734866|emb|CBI17100.3| unnamed protein
           product [Vitis vinifera]
          Length = 134

 Score =  127 bits (320), Expect = 2e-27
 Identities = 70/135 (51%), Positives = 78/135 (57%)
 Frame = +1

Query: 22  MDYSXXXXXXXXXXXXHAREVPSQNSFTLGGILFQRAWLQXXXXXXXXXXXXXXXXXXXX 201
           MDYS             A+E  SQN+FTLGG+LFQRAWLQ                    
Sbjct: 1   MDYSLAALKVMCGQLRKAKETTSQNAFTLGGVLFQRAWLQGVLVSVSDDAQGRFVLDDGT 60

Query: 202 XXXIELSLSGDFRLRQWKIXXXXXXXXXXXARAGEPPMIKVHKIVDLSSSPDREAMWYLE 381
              I LSLSGDF  R WKI            R+GEPPMIKVHKIVDLS  PDRE+MWYLE
Sbjct: 61  GV-IHLSLSGDFLHRNWKIGMYVMVVGGYFVRSGEPPMIKVHKIVDLSPFPDRESMWYLE 119

Query: 382 VMEAYKLFYQPLVEE 426
           V+EA++LFYQPL EE
Sbjct: 120 VIEAFRLFYQPLYEE 134


>ref|XP_003538189.1| PREDICTED: recQ-mediated genome instability protein 2-like [Glycine
           max]
          Length = 142

 Score =  126 bits (316), Expect = 5e-27
 Identities = 74/145 (51%), Positives = 82/145 (56%), Gaps = 8/145 (5%)
 Frame = +1

Query: 22  MDYSXXXXXXXXXXXXHAREVP--------SQNSFTLGGILFQRAWLQXXXXXXXXXXXX 177
           MDY              AREV         SQ+SFTLGG+LFQR WLQ            
Sbjct: 1   MDYDLAALKLFCSQLKQAREVAMPCQTQSQSQSSFTLGGLLFQRPWLQGVLVSASDAGSL 60

Query: 178 XXXXXXXXXXXIELSLSGDFRLRQWKIXXXXXXXXXXXARAGEPPMIKVHKIVDLSSSPD 357
                      +ELSL+ +FR R WK+           AR G+ PMIKVHKIVDLSSSP+
Sbjct: 61  LLDDGTDL---VELSLNSEFRHRPWKLGMYVMVVGGYAARPGKLPMIKVHKIVDLSSSPN 117

Query: 358 REAMWYLEVMEAYKLFYQPLVEEFT 432
           REAMWYLEVMEAYKLFYQPLVEEFT
Sbjct: 118 REAMWYLEVMEAYKLFYQPLVEEFT 142


>ref|NP_172315.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20258784|gb|AAM13914.1| unknown protein [Arabidopsis
           thaliana] gi|332190163|gb|AEE28284.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 137

 Score =  125 bits (314), Expect = 9e-27
 Identities = 63/137 (45%), Positives = 79/137 (57%)
 Frame = +1

Query: 22  MDYSXXXXXXXXXXXXHAREVPSQNSFTLGGILFQRAWLQXXXXXXXXXXXXXXXXXXXX 201
           MDYS             A+  PSQN+ +LGG+LFQRAWLQ                    
Sbjct: 1   MDYSLAAVKMLCSQLRDAKPTPSQNAASLGGVLFQRAWLQGVLVPFSGGGGDNCLVLDDG 60

Query: 202 XXXIELSLSGDFRLRQWKIXXXXXXXXXXXARAGEPPMIKVHKIVDLSSSPDREAMWYLE 381
              +EL L+ DF LRQWK             R G+ P++KVHK+VDLS SPDREAMWYLE
Sbjct: 61  TGLLELGLTNDFALRQWKSGMYVMVVGVYQVRTGQIPLLKVHKMVDLSVSPDREAMWYLE 120

Query: 382 VMEAYKLFYQPLVEEFT 432
           VM+AY+LFY+PL++EF+
Sbjct: 121 VMDAYRLFYEPLIQEFS 137


>ref|XP_002889690.1| hypothetical protein ARALYDRAFT_470900 [Arabidopsis lyrata subsp.
           lyrata] gi|297335532|gb|EFH65949.1| hypothetical protein
           ARALYDRAFT_470900 [Arabidopsis lyrata subsp. lyrata]
          Length = 136

 Score =  122 bits (305), Expect = 1e-25
 Identities = 64/137 (46%), Positives = 78/137 (56%)
 Frame = +1

Query: 22  MDYSXXXXXXXXXXXXHAREVPSQNSFTLGGILFQRAWLQXXXXXXXXXXXXXXXXXXXX 201
           MDYS             A+  PSQN+  LGG+LFQRAWLQ                    
Sbjct: 1   MDYSLAAVKMLCSQLRDAKPTPSQNATALGGVLFQRAWLQGVLVPISGGGDNHMVLDDGT 60

Query: 202 XXXIELSLSGDFRLRQWKIXXXXXXXXXXXARAGEPPMIKVHKIVDLSSSPDREAMWYLE 381
              +EL LS DF LRQWK             R G+ P++KVHK+VDLS SPDREAMWYLE
Sbjct: 61  GL-VELGLSSDFALRQWKSGMYVMVVGVYHIRTGDIPLLKVHKMVDLSVSPDREAMWYLE 119

Query: 382 VMEAYKLFYQPLVEEFT 432
           VM+AY+LFY+PL++EF+
Sbjct: 120 VMDAYRLFYEPLIQEFS 136


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