BLASTX nr result

ID: Glycyrrhiza24_contig00026354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026354
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    75   6e-12
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    71   1e-10
ref|XP_003605183.1| Cytochrome P450 [Medicago truncatula] gi|355...    71   1e-10
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...    69   4e-10
ref|XP_003594556.1| hypothetical protein MTR_2g030550 [Medicago ...    68   9e-10

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/95 (44%), Positives = 49/95 (51%)
 Frame = +3

Query: 6   GMCLRDSTGNVLGSRTR*YSLRLEVKEGEALGLLEAINWANSLHLSNVMFELDSKIAXXX 185
           GMC+RD  G  L + T  Y      +E EA+GL +AI W   L LSNV  ELD K+    
Sbjct: 83  GMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDAILWLGQLELSNVQLELDCKLVVDS 142

Query: 186 XXXXXXXXXEFGVIIDDCRRLLALSATFGVGFVRR 290
                    EFG IIDDCR LL     F + FVRR
Sbjct: 143 IYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVRR 177


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/97 (40%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
 Frame = +3

Query: 3    LGMCLRDSTGNVLGSRTR*YSLRLEVKEGEALGLLEAINWANSLHLSNVMFELDSKIAXX 182
            +G+C+RD +G ++ +RT   +L L+V EGEA+GLL AI WA   +L+N+ FELDSK    
Sbjct: 1589 IGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLYAIRWAKEQNLNNITFELDSKRVVY 1648

Query: 183  XXXXXXXXXXEFGVIIDDCRRLLALSATFG-VGFVRR 290
                      + G II +CR   +   T   V F+RR
Sbjct: 1649 SFHNTRNDVSDLGAIIRECRTTFSSFFTNSRVEFIRR 1685


>ref|XP_003605183.1| Cytochrome P450 [Medicago truncatula] gi|355506238|gb|AES87380.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 348

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 41/97 (42%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
 Frame = +3

Query: 3   LGMCLRDSTGNVLGSRTR*YSLRLEVKEGEALGLLEAINWANSLHLSNVMFELDSKIAXX 182
           +G+C+RD  G  + ++T   S   +V  GEALGLL A+ W  +L L  V FELDSKI   
Sbjct: 230 IGVCIRDEEGRYVLAKTEWMSPLFDVDLGEALGLLSAMYWVRNLQLGIVDFELDSKIVVD 289

Query: 183 XXXXXXXXXXEFGVIIDDCRRLLALS-ATFGVGFVRR 290
                      F  +I+DCRRLLA    T  V F+RR
Sbjct: 290 SLYGSKIGVSNFSAVINDCRRLLASDLVTSDVRFIRR 326


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
 Frame = +3

Query: 3   LGMCLRDSTGNVLGSRTR*YSLRLEVKEGEALGLLEAINWANSLHLSNVMFELDSKIAXX 182
           +G+C+RD  G  + ++T   +  L+V+ GEALGLL A++W   L L  V FELDSK    
Sbjct: 553 IGVCIRDEEGRFVLAKTEWMTPLLDVELGEALGLLSAMHWVRDLQLGIVDFELDSKSVVD 612

Query: 183 XXXXXXXXXXEFGVIIDDCRRLLALS-ATFGVGFVRR 290
                      F  +I++CRRLLA    T  V F+RR
Sbjct: 613 SLYGSTSGVSNFSAVINECRRLLASDLVTSDVRFIRR 649


>ref|XP_003594556.1| hypothetical protein MTR_2g030550 [Medicago truncatula]
           gi|355483604|gb|AES64807.1| hypothetical protein
           MTR_2g030550 [Medicago truncatula]
          Length = 152

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/80 (45%), Positives = 45/80 (56%)
 Frame = +3

Query: 6   GMCLRDSTGNVLGSRTR*YSLRLEVKEGEALGLLEAINWANSLHLSNVMFELDSKIAXXX 185
           GMC+RD  G  + ++T   S   +   GEALGL  AI W + L L+NV FE+D+K A   
Sbjct: 23  GMCIRDEVGQFVAAKTLRSSPICDSSIGEALGLSYAIQWVHELQLTNVDFEMDAKRAVDY 82

Query: 186 XXXXXXXXXEFGVIIDDCRR 245
                    EFG IIDDCRR
Sbjct: 83  YIKGSNDISEFGAIIDDCRR 102


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