BLASTX nr result

ID: Glycyrrhiza24_contig00026350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026350
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616240.1| DEAD-box ATP-dependent RNA helicase [Medicag...    84   9e-15
ref|XP_003531800.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    80   2e-13
ref|XP_003545461.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...    72   4e-11
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    55   8e-06

>ref|XP_003616240.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355517575|gb|AES99198.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 497

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/54 (75%), Positives = 47/54 (87%)
 Frame = -1

Query: 462 EVRRFKKLMQKAEGSSCLEHIVPSSLTEALNPTYQSALTKYKQIILEKRKKPKD 301
           EVRRFKKL+ KAEG SCL+HIVPSS  EALN TY+SALTKYK+II + RKKPK+
Sbjct: 444 EVRRFKKLIGKAEGGSCLDHIVPSSQIEALNTTYESALTKYKEIISKTRKKPKN 497


>ref|XP_003531800.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           1-like [Glycine max]
          Length = 617

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/62 (67%), Positives = 51/62 (82%)
 Frame = -1

Query: 462 EVRRFKKLMQKAEGSSCLEHIVPSSLTEALNPTYQSALTKYKQIILEKRKKPKD*NLLNR 283
           EV RFKKLM+KAE S CLE+ VPSSL EAL+ TYQSALTK K+ ILE R+KP+  +L+NR
Sbjct: 557 EVXRFKKLMKKAEASDCLEYTVPSSLIEALHSTYQSALTKLKEKILESRRKPRI-SLVNR 615

Query: 282 AK 277
           +K
Sbjct: 616 SK 617


>ref|XP_003545461.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
           1-like [Glycine max]
          Length = 492

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/62 (61%), Positives = 49/62 (79%)
 Frame = -1

Query: 462 EVRRFKKLMQKAEGSSCLEHIVPSSLTEALNPTYQSALTKYKQIILEKRKKPKD*NLLNR 283
           EV  F+KLM+KAE S CL+H VPSSL EAL+ TY SALTK K+ ILE R+KP+  +L+NR
Sbjct: 432 EVGGFEKLMKKAEASDCLQHTVPSSLIEALHSTYSSALTKLKEKILEARRKPRI-SLVNR 490

Query: 282 AK 277
           ++
Sbjct: 491 SE 492


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/65 (44%), Positives = 39/65 (60%)
 Frame = -1

Query: 462 EVRRFKKLMQKAEGSSCLEHIVPSSLTEALNPTYQSALTKYKQIILEKRKKPKD*NLLNR 283
           EV+RFKKL+QKA+  SC  H +PSS  E L PTY SAL K K+ +  +  +       +R
Sbjct: 444 EVKRFKKLLQKADNDSCPVHNLPSSSIEFLQPTYVSALEKLKEKVESETSRKSTITSSSR 503

Query: 282 AKRMK 268
           A + K
Sbjct: 504 AGKQK 508


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