BLASTX nr result

ID: Glycyrrhiza24_contig00026349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026349
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554813.1| PREDICTED: denticleless protein homolog [Gly...   204   5e-51
ref|XP_003525673.1| PREDICTED: denticleless protein homolog [Gly...   199   3e-49
ref|XP_003618155.1| Coatomer protein complex subunit alpha [Medi...   177   1e-42
ref|XP_002300052.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
emb|CBI34872.3| unnamed protein product [Vitis vinifera]              173   1e-41

>ref|XP_003554813.1| PREDICTED: denticleless protein homolog [Glycine max]
          Length = 506

 Score =  204 bits (520), Expect = 5e-51
 Identities = 98/110 (89%), Positives = 104/110 (94%)
 Frame = +2

Query: 2   LSQDDSGLLLSASCMDNRVYLYNTLQLEKGPLRSFSGCRIESFFVKSAISPDASNIVCGS 181
           LSQD+SGL LSASCMDNR+YLYNTLQLEKGPL+SFSGCRIESFFVKSAISPDASNIV GS
Sbjct: 276 LSQDESGLFLSASCMDNRIYLYNTLQLEKGPLKSFSGCRIESFFVKSAISPDASNIVSGS 335

Query: 182 SDGRARVWKVNKPQEEPTILKSHDGEVTAVDWCYSEVGKLATCSDDFTVR 331
           SDG A VWKV+KP E+PTILKSHDGEVTAVDWC SE+GKLATCSDDFTVR
Sbjct: 336 SDGNAYVWKVDKPLEDPTILKSHDGEVTAVDWCSSEIGKLATCSDDFTVR 385


>ref|XP_003525673.1| PREDICTED: denticleless protein homolog [Glycine max]
          Length = 509

 Score =  199 bits (505), Expect = 3e-49
 Identities = 97/111 (87%), Positives = 104/111 (93%), Gaps = 1/111 (0%)
 Frame = +2

Query: 2   LSQDDSGLLLSASCMDNRVYLYNTLQLEKGPLRSFSGCRIESFFVKSAISPDASNIVCGS 181
           LSQD+SGL LSASCMDNR+YLYNTLQL+KGPL+SFSGCRIESFFVKSAISPDASNIV GS
Sbjct: 276 LSQDESGLFLSASCMDNRIYLYNTLQLDKGPLKSFSGCRIESFFVKSAISPDASNIVSGS 335

Query: 182 SDGRARVWKVNKPQEEPTILKSH-DGEVTAVDWCYSEVGKLATCSDDFTVR 331
           SDG A VWKV+KP E+PTILKSH DGEVTAVDWC SE+GKLATCSDDFTVR
Sbjct: 336 SDGNAYVWKVDKPLEDPTILKSHDDGEVTAVDWCSSEIGKLATCSDDFTVR 386


>ref|XP_003618155.1| Coatomer protein complex subunit alpha [Medicago truncatula]
           gi|355493170|gb|AES74373.1| Coatomer protein complex
           subunit alpha [Medicago truncatula]
          Length = 504

 Score =  177 bits (448), Expect = 1e-42
 Identities = 87/109 (79%), Positives = 97/109 (88%)
 Frame = +2

Query: 2   LSQDDSGLLLSASCMDNRVYLYNTLQLEKGPLRSFSGCRIESFFVKSAISPDASNIVCGS 181
           LSQDDSGLLLSASCMD+RVYLYNTLQLEKG LR F G RIESFF+K+AISPDASNIVCGS
Sbjct: 274 LSQDDSGLLLSASCMDSRVYLYNTLQLEKGALRYFEGGRIESFFIKAAISPDASNIVCGS 333

Query: 182 SDGRARVWKVNKPQEEPTILKSHDGEVTAVDWCYSEVGKLATCSDDFTV 328
           S+ +A VW+V+KPQ EPTILKSH  EVTAVDWC S+ GKLAT SDDF++
Sbjct: 334 SNAKAYVWQVDKPQVEPTILKSHYEEVTAVDWCRSDNGKLATASDDFSI 382


>ref|XP_002300052.1| predicted protein [Populus trichocarpa] gi|222847310|gb|EEE84857.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  176 bits (446), Expect = 2e-42
 Identities = 81/110 (73%), Positives = 97/110 (88%)
 Frame = +2

Query: 2   LSQDDSGLLLSASCMDNRVYLYNTLQLEKGPLRSFSGCRIESFFVKSAISPDASNIVCGS 181
           LSQD +G+ L+A+CMDNR+YLYN LQL+KGP+RSFSGCRIESF+VKS ISPDA++I+ GS
Sbjct: 271 LSQDLNGVFLTATCMDNRIYLYNVLQLDKGPMRSFSGCRIESFYVKSTISPDAAHILSGS 330

Query: 182 SDGRARVWKVNKPQEEPTILKSHDGEVTAVDWCYSEVGKLATCSDDFTVR 331
           SDG A +W+VNKP  +P  LK+HDGEVTAVDWC SEVGK+AT SDDFTVR
Sbjct: 331 SDGNAYIWQVNKPDVDPITLKTHDGEVTAVDWCPSEVGKIATSSDDFTVR 380


>emb|CBI34872.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  173 bits (438), Expect = 1e-41
 Identities = 78/110 (70%), Positives = 96/110 (87%)
 Frame = +2

Query: 2   LSQDDSGLLLSASCMDNRVYLYNTLQLEKGPLRSFSGCRIESFFVKSAISPDASNIVCGS 181
           LSQD +G+ +SASCMDNR+YLYN L LEKGP+ SFSGCRIESF+VKS ISPDA++I+ GS
Sbjct: 276 LSQDSNGVFISASCMDNRIYLYNVLNLEKGPINSFSGCRIESFYVKSTISPDAAHILSGS 335

Query: 182 SDGRARVWKVNKPQEEPTILKSHDGEVTAVDWCYSEVGKLATCSDDFTVR 331
           SDG A +W+VNKP  +P +LKSH+GEVTAVDWC SE+GK+AT SDD++VR
Sbjct: 336 SDGSAYIWQVNKPLADPILLKSHEGEVTAVDWCSSELGKIATSSDDYSVR 385


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