BLASTX nr result

ID: Glycyrrhiza24_contig00026340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026340
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551081.1| PREDICTED: uncharacterized protein LOC100797...    81   8e-14
ref|XP_004143806.1| PREDICTED: transcription factor GTE1-like [C...    68   9e-10
ref|XP_002276963.2| PREDICTED: transcription factor GTE1-like [V...    62   5e-08
ref|XP_002315289.1| global transcription factor group [Populus t...    62   5e-08
ref|XP_002529721.1| bromodomain-containing protein, putative [Ri...    59   4e-07

>ref|XP_003551081.1| PREDICTED: uncharacterized protein LOC100797746 [Glycine max]
          Length = 738

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/77 (59%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
 Frame = +2

Query: 2   TGNPNGGLALEIEGLEHHVDELNSKVDKLTQKMHIIYNLNLKKKQNM---PKGNTAMKDK 172
           T N NG    EIEG +  VDE+ SKVDKL QK+H I N      +N    PKGN+A KDK
Sbjct: 382 TANSNG--ENEIEGFKQRVDEIISKVDKLEQKVHDIENFYSSMNKNQTSTPKGNSAAKDK 439

Query: 173 DKEKHVPSIEKQQLDAS 223
           DKEKHVPSI+KQQ DAS
Sbjct: 440 DKEKHVPSIKKQQQDAS 456


>ref|XP_004143806.1| PREDICTED: transcription factor GTE1-like [Cucumis sativus]
           gi|449485919|ref|XP_004157310.1| PREDICTED:
           transcription factor GTE1-like [Cucumis sativus]
          Length = 378

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/67 (53%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
 Frame = +2

Query: 32  EIEGLEHHVDELNSKVDKLTQKMHII--YNLNLKKKQ-NMPKGNTAMKDKDKEKHVPSIE 202
           E++G  H VDE+  KVD+L Q ++ I  + L LKKKQ N  KG++ +KDKDKE+HVPSI+
Sbjct: 18  EVDGFRHQVDEIFLKVDRLEQNVNEIEQFYLTLKKKQPNGNKGSSIVKDKDKERHVPSIK 77

Query: 203 KQQLDAS 223
           KQQ +A+
Sbjct: 78  KQQQEAA 84


>ref|XP_002276963.2| PREDICTED: transcription factor GTE1-like [Vitis vinifera]
          Length = 440

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/75 (45%), Positives = 52/75 (69%), Gaps = 5/75 (6%)
 Frame = +2

Query: 14  NGGLALEIEGLEHHVDELNSKVDKLTQKMHIIYNLNL---KKKQNMPKGNTAMKDKDK-- 178
           N G A ++E L+  VD++ +KVDKL Q+++ +    L   KK+ N+ KG++ +KDKDK  
Sbjct: 70  NQGNAAQVESLKSRVDDIFTKVDKLEQRVNEVEQFYLTASKKQLNVSKGSSIVKDKDKDK 129

Query: 179 EKHVPSIEKQQLDAS 223
           E+HV S++KQQ DAS
Sbjct: 130 ERHVASVKKQQQDAS 144


>ref|XP_002315289.1| global transcription factor group [Populus trichocarpa]
           gi|222864329|gb|EEF01460.1| global transcription factor
           group [Populus trichocarpa]
          Length = 318

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 6/70 (8%)
 Frame = +2

Query: 32  EIEGLEHHVDELNSKVDKLTQKMHII--YNLNLKKKQNMPK----GNTAMKDKDKEKHVP 193
           + EG +H VDE+  KVDKL Q+M+ +  + L++ KKQ        G++ +KDKDKE+HV 
Sbjct: 5   DTEGFKHSVDEIFQKVDKLEQRMNGVEQFYLDISKKQQSGSSKGGGSSIVKDKDKERHVT 64

Query: 194 SIEKQQLDAS 223
           SI KQQ DAS
Sbjct: 65  SIRKQQQDAS 74


>ref|XP_002529721.1| bromodomain-containing protein, putative [Ricinus communis]
           gi|223530823|gb|EEF32687.1| bromodomain-containing
           protein, putative [Ricinus communis]
          Length = 391

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 11/84 (13%)
 Frame = +2

Query: 5   GNPNGGLALEIEGLEHHVDELNSKVDKLTQKMHII--YNLNLKKKQNM-------PKGNT 157
           G+ + G ++EI+G +H VDEL  KVDKL Q+++ +  + LN+ KKQ          KG++
Sbjct: 12  GSYDFGNSVEIDGYKHRVDELFHKVDKLEQRVNEVELFYLNVNKKQQQQSGGGGNSKGSS 71

Query: 158 AMKD-KDKEKH-VPSIEKQQLDAS 223
            +KD  +KE+H VPSI KQQ DAS
Sbjct: 72  IVKDNNNKERHSVPSIRKQQQDAS 95


Top