BLASTX nr result

ID: Glycyrrhiza24_contig00026297 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026297
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589591.1| Replication factor C large subunit [Medicago...    80   2e-13
ref|XP_003544683.1| PREDICTED: uncharacterized protein LOC100815...    74   2e-11

>ref|XP_003589591.1| Replication factor C large subunit [Medicago truncatula]
            gi|355478639|gb|AES59842.1| Replication factor C large
            subunit [Medicago truncatula]
          Length = 1178

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/44 (81%), Positives = 42/44 (95%)
 Frame = +3

Query: 3    RSAQHYLSRGKMMLSPEDISLVCEGDLYRKISSQYDADMESNCT 134
            R+A+HYLSRGKM+LSPEDISL+CEGDLYRKISSQY ++ME NCT
Sbjct: 1135 RNAEHYLSRGKMVLSPEDISLLCEGDLYRKISSQYASNMEINCT 1178


>ref|XP_003544683.1| PREDICTED: uncharacterized protein LOC100815984 [Glycine max]
          Length = 49

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = +3

Query: 3   RSAQHYLSRGKMMLSPEDISLVCEGDLYRKISSQYDADMESNCT 134
           R A HYLSRG+M LSPE ISLVCEGDL+R ISSQY A+MESNCT
Sbjct: 6   RVAPHYLSRGRMALSPEIISLVCEGDLFRNISSQYTANMESNCT 49


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