BLASTX nr result

ID: Glycyrrhiza24_contig00026271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026271
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554312.1| PREDICTED: WD repeat-containing protein 26-l...   110   2e-22
ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communi...   105   8e-21
ref|XP_004152068.1| PREDICTED: WD repeat-containing protein 26-l...   105   1e-20
ref|XP_002865396.1| transducin family protein [Arabidopsis lyrat...    96   1e-17
ref|NP_199205.1| transducin/WD40 domain-containing protein [Arab...    95   2e-17

>ref|XP_003554312.1| PREDICTED: WD repeat-containing protein 26-like [Glycine max]
          Length = 523

 Score =  110 bits (276), Expect = 2e-22
 Identities = 51/76 (67%), Positives = 64/76 (84%)
 Frame = +2

Query: 506 METHSEVLGSKGLIKKQEFVRIIVQCLYSLGYTKSASCLESESGVSYKSKEFQLLESHVL 685
           ME   EVLGSKGLI++ EFVRII+QCLYSLGY+ SASCLESESG+SYKS E +LLES +L
Sbjct: 1   MENPCEVLGSKGLIRRHEFVRIIIQCLYSLGYSSSASCLESESGISYKSNEVKLLESLIL 60

Query: 686 GGNWDACVSFLNSMRE 733
            G+WD  + +LNS+++
Sbjct: 61  NGSWDESIDYLNSIKD 76


>ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communis]
           gi|223526484|gb|EEF28755.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 523

 Score =  105 bits (263), Expect = 8e-21
 Identities = 48/76 (63%), Positives = 64/76 (84%)
 Frame = +2

Query: 506 METHSEVLGSKGLIKKQEFVRIIVQCLYSLGYTKSASCLESESGVSYKSKEFQLLESHVL 685
           ME  + V+G+KGLIK+ EFVR+I+Q L+SLGY KSASCLE ESG+SYKS +F+LLES +L
Sbjct: 1   MENSTVVIGTKGLIKRHEFVRVIIQSLWSLGYKKSASCLEIESGISYKSVDFELLESQIL 60

Query: 686 GGNWDACVSFLNSMRE 733
            GNW+ CV+ LN+++E
Sbjct: 61  EGNWNGCVNTLNTVKE 76


>ref|XP_004152068.1| PREDICTED: WD repeat-containing protein 26-like [Cucumis sativus]
           gi|449528106|ref|XP_004171047.1| PREDICTED: WD
           repeat-containing protein 26-like [Cucumis sativus]
          Length = 298

 Score =  105 bits (262), Expect = 1e-20
 Identities = 46/75 (61%), Positives = 60/75 (80%)
 Frame = +2

Query: 506 METHSEVLGSKGLIKKQEFVRIIVQCLYSLGYTKSASCLESESGVSYKSKEFQLLESHVL 685
           ME+ S +LGSKGLI+K EFVR+I+QCLYS GY KSA CLE+ESG+SYKS +F+LLES + 
Sbjct: 1   MESSSVLLGSKGLIRKHEFVRVIIQCLYSFGYQKSALCLEAESGISYKSSDFKLLESQIF 60

Query: 686 GGNWDACVSFLNSMR 730
            GNW  C+  +N ++
Sbjct: 61  SGNWYGCIDTINGIK 75


>ref|XP_002865396.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311231|gb|EFH41655.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 523

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 43/72 (59%), Positives = 58/72 (80%)
 Frame = +2

Query: 521 EVLGSKGLIKKQEFVRIIVQCLYSLGYTKSASCLESESGVSYKSKEFQLLESHVLGGNWD 700
           EVLGSKGL+KK EF+RI+VQCLYSLG+  SASCLE ES +S KS +++ LE  VL G+WD
Sbjct: 7   EVLGSKGLLKKHEFIRILVQCLYSLGFKNSASCLEIESNISCKSADYESLEKRVLSGDWD 66

Query: 701 ACVSFLNSMREY 736
           +CV+ L+ + ++
Sbjct: 67  SCVAVLDRIFDH 78


>ref|NP_199205.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|9758551|dbj|BAB09052.1| WD-repeat protein-like
           [Arabidopsis thaliana] gi|110742722|dbj|BAE99272.1|
           WD-repeat protein-like [Arabidopsis thaliana]
           gi|148535209|gb|ABQ85545.1| will die slowly [Arabidopsis
           thaliana] gi|332007645|gb|AED95028.1| transducin/WD40
           domain-containing protein [Arabidopsis thaliana]
          Length = 523

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 43/67 (64%), Positives = 53/67 (79%)
 Frame = +2

Query: 521 EVLGSKGLIKKQEFVRIIVQCLYSLGYTKSASCLESESGVSYKSKEFQLLESHVLGGNWD 700
           EVLGSKGL+KK EF+RI+VQCLYSLG+  SASCLE ES + YK+ + + LE  VL GNWD
Sbjct: 7   EVLGSKGLLKKHEFIRILVQCLYSLGFKNSASCLEFESKILYKTADSEFLEKQVLSGNWD 66

Query: 701 ACVSFLN 721
           +CV  L+
Sbjct: 67  SCVQVLD 73


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