BLASTX nr result

ID: Glycyrrhiza24_contig00026261 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026261
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621725.1| F-box protein [Medicago truncatula] gi|35549...    63   3e-08
gb|ABD32486.1| Cyclin-like F-box [Medicago truncatula]                 55   6e-06
ref|XP_003618573.1| F-box family-3 [Medicago truncatula] gi|3554...    55   6e-06

>ref|XP_003621725.1| F-box protein [Medicago truncatula] gi|355496740|gb|AES77943.1|
           F-box protein [Medicago truncatula]
          Length = 409

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 12/101 (11%)
 Frame = +2

Query: 2   HLREVHFVGQAYLVEILSACPTLEILLMKFLRF-DNVLSGGDFIHL---PKLVKVDISRS 169
           HL +VHF+   +L++ILS  P LE LL+K L+  DN L+  D   L   PKL++ D+S S
Sbjct: 201 HLTQVHFLKLKFLIKILSMSPLLEDLLLKDLQVTDNTLAHDDAAALKPFPKLLRADVSES 260

Query: 170 NI---FLPLEALCNVELLRADVMVPT-----GSHTFLNLTY 268
           +I    LPL+   NV+ LR+ V++ T      +  FLNLT+
Sbjct: 261 SISAFLLPLKLFYNVQFLRSQVLLQTLEQDFSTTQFLNLTH 301


>gb|ABD32486.1| Cyclin-like F-box [Medicago truncatula]
          Length = 392

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 40/96 (41%), Positives = 50/96 (52%), Gaps = 17/96 (17%)
 Frame = +2

Query: 2   HLREVHFVGQAYLVEILSACPTLEILLMKFLRFDNVLSGGDFIHL--------------P 139
           H+ +VHF+   YL++ILS CP LE LL+K     NV +  D   L              P
Sbjct: 163 HMTKVHFLKLKYLIQILSVCPLLEDLLIK-----NVTTNDDNDTLDALTKQRDKLLKPFP 217

Query: 140 KLVKVDISRS---NIFLPLEALCNVELLRADVMVPT 238
           KL+K  IS S   + FLPL+   NVE LRA V V T
Sbjct: 218 KLLKAHISDSSSISSFLPLKLFYNVEFLRAQVAVQT 253


>ref|XP_003618573.1| F-box family-3 [Medicago truncatula] gi|355493588|gb|AES74791.1|
           F-box family-3 [Medicago truncatula]
          Length = 408

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 40/96 (41%), Positives = 50/96 (52%), Gaps = 17/96 (17%)
 Frame = +2

Query: 2   HLREVHFVGQAYLVEILSACPTLEILLMKFLRFDNVLSGGDFIHL--------------P 139
           H+ +VHF+   YL++ILS CP LE LL+K     NV +  D   L              P
Sbjct: 182 HMTKVHFLKLKYLIQILSVCPLLEDLLIK-----NVTTNDDNDTLDALTKQRDKLLKPFP 236

Query: 140 KLVKVDISRS---NIFLPLEALCNVELLRADVMVPT 238
           KL+K  IS S   + FLPL+   NVE LRA V V T
Sbjct: 237 KLLKAHISDSSSISSFLPLKLFYNVEFLRAQVAVQT 272


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