BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026256
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003622500.1| Pentatricopeptide repeat-containing protein ...   200   9e-50
ref|XP_003529934.1| PREDICTED: pentatricopeptide repeat-containi...   195   3e-48
ref|XP_003548452.1| PREDICTED: pentatricopeptide repeat-containi...   187   6e-46
emb|CBI40438.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32

>ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355497515|gb|AES78718.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 655

 Score =  200 bits (509), Expect = 9e-50
 Identities = 98/109 (89%), Positives = 103/109 (94%)
 Frame = -2

Query: 327 TETLQAHAFAVKLSFQDFLSVANSLISAYSKCGSITSAFKCFRLTSQPDLVTWTSLIYAY 148
           TETLQ HAFAVKLS QDFLSVANSLISAYSKCGSITSAFKCF LTSQPDLVTWTSLIYAY
Sbjct: 388 TETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAY 447

Query: 147 AFHGLAKEATEMFEKMLSLGIIPDRISFLGVLSACSHCGLVTTGLHYFK 1
           AFHGLA+++TEMFEKMLS GI PDRI+FLGVLSAC+HCGLVT GLHYFK
Sbjct: 448 AFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFK 496



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/101 (28%), Positives = 56/101 (55%)
 Frame = -2

Query: 315 QAHAFAVKLSFQDFLSVANSLISAYSKCGSITSAFKCFRLTSQPDLVTWTSLIYAYAFHG 136
           Q H+  ++ SF   + VA++LI+ Y+K  +I  A + F   S  ++V W ++I  +  HG
Sbjct: 291 QVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHG 350

Query: 135 LAKEATEMFEKMLSLGIIPDRISFLGVLSACSHCGLVTTGL 13
              E  ++ ++ML  G +PD ++   ++S+C +   +T  L
Sbjct: 351 DGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITETL 391



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/93 (33%), Positives = 47/93 (50%)
 Frame = -2

Query: 318 LQAHAFAVKLSFQDFLSVANSLISAYSKCGSITSAFKCFRLTSQPDLVTWTSLIYAYAFH 139
           +Q H F VK+ F     V  +L+  Y+KCG + +A + F   S  DLV W  ++  Y F+
Sbjct: 187 VQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFN 246

Query: 138 GLAKEATEMFEKMLSLGIIPDRISFLGVLSACS 40
            L +EA  +F  M    +  D  +F  +LS  S
Sbjct: 247 SLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVIS 279


>ref|XP_003529934.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial-like [Glycine max]
          Length = 644

 Score =  195 bits (496), Expect = 3e-48
 Identities = 96/108 (88%), Positives = 102/108 (94%)
 Frame = -2

Query: 327 TETLQAHAFAVKLSFQDFLSVANSLISAYSKCGSITSAFKCFRLTSQPDLVTWTSLIYAY 148
           TET+QAHAFAVK SFQ+FLSVANSLISAYSKCGSITSA KCFRLT +PDLV+WTSLI AY
Sbjct: 377 TETMQAHAFAVKSSFQEFLSVANSLISAYSKCGSITSACKCFRLTREPDLVSWTSLINAY 436

Query: 147 AFHGLAKEATEMFEKMLSLGIIPDRISFLGVLSACSHCGLVTTGLHYF 4
           AFHGLAKEATE+FEKMLS GIIPD+ISFLGVLSACSHCGLVT GLHYF
Sbjct: 437 AFHGLAKEATEVFEKMLSCGIIPDQISFLGVLSACSHCGLVTKGLHYF 484



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/91 (36%), Positives = 46/91 (50%)
 Frame = -2

Query: 315 QAHAFAVKLSFQDFLSVANSLISAYSKCGSITSAFKCFRLTSQPDLVTWTSLIYAYAFHG 136
           Q H FAVKL       V + L+  Y++CG + +A + F +    DLV W  +I  YA + 
Sbjct: 179 QLHCFAVKLGLDLDCFVGSVLVDLYAQCGLVENARRVFLVVQHRDLVVWNVMISCYALNC 238

Query: 135 LAKEATEMFEKMLSLGIIPDRISFLGVLSAC 43
           L +EA  MF  M   G   D  +F  +LS C
Sbjct: 239 LPEEAFVMFNLMRWDGANGDEFTFSNLLSIC 269


>ref|XP_003548452.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  187 bits (476), Expect = 6e-46
 Identities = 91/108 (84%), Positives = 97/108 (89%)
 Frame = -2

Query: 327 TETLQAHAFAVKLSFQDFLSVANSLISAYSKCGSITSAFKCFRLTSQPDLVTWTSLIYAY 148
           TET++AH F VK SFQ+F SVANSLISAYSKCGSITSA KCFRLT +PDLVTWTSLI AY
Sbjct: 377 TETMEAHVFVVKSSFQEFSSVANSLISAYSKCGSITSACKCFRLTREPDLVTWTSLINAY 436

Query: 147 AFHGLAKEATEMFEKMLSLGIIPDRISFLGVLSACSHCGLVTTGLHYF 4
           AFHGLAKEA E+FEKMLS G+IPDRISFLGV SACSHCGLVT GLHYF
Sbjct: 437 AFHGLAKEAIEVFEKMLSCGVIPDRISFLGVFSACSHCGLVTKGLHYF 484



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/91 (36%), Positives = 46/91 (50%)
 Frame = -2

Query: 315 QAHAFAVKLSFQDFLSVANSLISAYSKCGSITSAFKCFRLTSQPDLVTWTSLIYAYAFHG 136
           Q H FAVK        V + L+  Y+KCG + +A + F +  + DLV W  +I  YA + 
Sbjct: 179 QLHCFAVKFGLDLDCFVESVLVDLYAKCGLVENAKRAFHVVPRRDLVMWNVMISCYALNW 238

Query: 135 LAKEATEMFEKMLSLGIIPDRISFLGVLSAC 43
           L +EA  MF  M   G   D  +F  +LS C
Sbjct: 239 LPEEAFGMFNLMRLGGANGDEFTFSSLLSIC 269


>emb|CBI40438.3| unnamed protein product [Vitis vinifera]
          Length = 1079

 Score =  142 bits (358), Expect = 3e-32
 Identities = 64/108 (59%), Positives = 86/108 (79%)
 Frame = -2

Query: 327 TETLQAHAFAVKLSFQDFLSVANSLISAYSKCGSITSAFKCFRLTSQPDLVTWTSLIYAY 148
           +E +Q HA+ V+  F+ FLS+AN+L+SAYSKCGSI SAF+ F   ++PD+++WTSL+ AY
Sbjct: 360 SEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAY 419

Query: 147 AFHGLAKEATEMFEKMLSLGIIPDRISFLGVLSACSHCGLVTTGLHYF 4
           AFHGL+KE  E+FEKML   + PD+++FLGVLSAC+H G V  GLHYF
Sbjct: 420 AFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYF 467



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = -2

Query: 315 QAHAFAVKLSFQDFLSVANSLISAYSKCGSITSAFKCFRLTSQPDLVTWTSLIYAYAFHG 136
           Q H F +K  F     V ++L+ +Y+K G +  A   F   S  DLV W  ++  YA +G
Sbjct: 199 QLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNG 258

Query: 135 LAKEATEMFEKMLSLGIIPDRISFLGVLSAC---SHCGL 28
           +  +A  +F+ M   G+  D  +F  ++++C     CGL
Sbjct: 259 VQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGL 297


>ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
           mitochondrial [Vitis vinifera]
          Length = 673

 Score =  142 bits (358), Expect = 3e-32
 Identities = 64/108 (59%), Positives = 86/108 (79%)
 Frame = -2

Query: 327 TETLQAHAFAVKLSFQDFLSVANSLISAYSKCGSITSAFKCFRLTSQPDLVTWTSLIYAY 148
           +E +Q HA+ V+  F+ FLS+AN+L+SAYSKCGSI SAF+ F   ++PD+++WTSL+ AY
Sbjct: 397 SEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPDIISWTSLMGAY 456

Query: 147 AFHGLAKEATEMFEKMLSLGIIPDRISFLGVLSACSHCGLVTTGLHYF 4
           AFHGL+KE  E+FEKML   + PD+++FLGVLSAC+H G V  GLHYF
Sbjct: 457 AFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLEGLHYF 504



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/93 (33%), Positives = 53/93 (56%)
 Frame = -2

Query: 315 QAHAFAVKLSFQDFLSVANSLISAYSKCGSITSAFKCFRLTSQPDLVTWTSLIYAYAFHG 136
           Q H   ++LSF   + VA++L+  YSK  +I  A K F      ++V+WT++I  Y  HG
Sbjct: 300 QVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHG 359

Query: 135 LAKEATEMFEKMLSLGIIPDRISFLGVLSACSH 37
             KEA  + ++M+ +   PD ++   +LS+C +
Sbjct: 360 DGKEAMRLLQEMIRVYTYPDELALASILSSCGN 392



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
 Frame = -2

Query: 315 QAHAFAVKLSFQDFLSVANSLISAYSKCGSITSAFKCFRLTSQPDLVTWTSLIYAYAFHG 136
           Q H F +K  F     V ++L+ +Y+K G +  A   F   S  DLV W  ++  YA +G
Sbjct: 199 QLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNG 258

Query: 135 LAKEATEMFEKMLSLGIIPDRISFLGVLSAC---SHCGL 28
           +  +A  +F+ M   G+  D  +F  ++++C     CGL
Sbjct: 259 VQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGL 297