BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026254
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containi...   227   3e-72
ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containi...   228   1e-71
ref|XP_003638369.1| Pentatricopeptide repeat-containing protein ...   207   2e-65
ref|XP_002510791.1| pentatricopeptide repeat-containing protein,...   211   7e-62
ref|XP_002878314.1| pentatricopeptide repeat-containing protein ...   203   1e-60

>ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like isoform 1 [Glycine max]
           gi|356575967|ref|XP_003556107.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g60050-like isoform 2 [Glycine max]
          Length = 480

 Score =  227 bits (579), Expect(2) = 3e-72
 Identities = 107/140 (76%), Positives = 122/140 (87%), Gaps = 2/140 (1%)
 Frame = -3

Query: 416 VW--QQEGYCHTTNSYHLIMQIFVECEEFKAMWRLVDEMIEKGFPATARTFNILICACDE 243
           VW  QQEGY HT N+YHL+M I+ ECEEFKA+WRLVDEMIEKG PATARTFNILI  C E
Sbjct: 144 VWCSQQEGYQHTVNAYHLVMSIYAECEEFKALWRLVDEMIEKGLPATARTFNILIRTCGE 203

Query: 242 AGIAKKLMVKFMKSKSFNYRPFKHSYNAILHCLLVLNQYKLIEWVYGQMLIEGLSSDVFT 63
           AG+AK L+ +F+KSK+FN+RPFKHSYNAILH LLVLNQYKLIEWVY QML++G  SD+ T
Sbjct: 204 AGLAKNLVERFIKSKTFNFRPFKHSYNAILHGLLVLNQYKLIEWVYQQMLLDGFPSDILT 263

Query: 62  YNIVMLAKYRLGKLNQFHRM 3
           YNIVM AKYRLGKL+QFHR+
Sbjct: 264 YNIVMYAKYRLGKLDQFHRL 283



 Score = 70.5 bits (171), Expect(2) = 3e-72
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = -1

Query: 535 ELRVRPTGLFAREVLYGILREVNCENKTVIAKLAYKFFVWCGSR 404
           EL VRP+GL  REVL+GIL+ +NC+NKT  AKLAYKFFVWC  +
Sbjct: 106 ELHVRPSGLLVREVLFGILKNINCQNKTRCAKLAYKFFVWCSQQ 149


>ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Glycine max]
          Length = 480

 Score =  228 bits (580), Expect(2) = 1e-71
 Identities = 106/140 (75%), Positives = 123/140 (87%), Gaps = 2/140 (1%)
 Frame = -3

Query: 416 VW--QQEGYCHTTNSYHLIMQIFVECEEFKAMWRLVDEMIEKGFPATARTFNILICACDE 243
           VW  QQEGY HT N+YHL+M I+ ECEEFKA+WRLVDEM+EKG PATARTFNILI  C E
Sbjct: 144 VWCSQQEGYQHTVNAYHLVMNIYAECEEFKALWRLVDEMVEKGLPATARTFNILIRTCGE 203

Query: 242 AGIAKKLMVKFMKSKSFNYRPFKHSYNAILHCLLVLNQYKLIEWVYGQMLIEGLSSDVFT 63
           AG+AK L+ +F+KSK+FN+RPFKHSYNAILH LLVLNQYKLIEWVY Q+L++G SSD+ T
Sbjct: 204 AGLAKSLVERFIKSKTFNFRPFKHSYNAILHGLLVLNQYKLIEWVYQQLLLDGFSSDILT 263

Query: 62  YNIVMLAKYRLGKLNQFHRM 3
           YNIVM AKYRLGKL+QFHR+
Sbjct: 264 YNIVMYAKYRLGKLDQFHRL 283



 Score = 67.8 bits (164), Expect(2) = 1e-71
 Identities = 30/44 (68%), Positives = 35/44 (79%)
 Frame = -1

Query: 535 ELRVRPTGLFAREVLYGILREVNCENKTVIAKLAYKFFVWCGSR 404
           EL VR +GL  REVL+GIL+ +NCENKT  AKLAYKFFVWC  +
Sbjct: 106 ELHVRLSGLLVREVLFGILKHINCENKTRCAKLAYKFFVWCSQQ 149


>ref|XP_003638369.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355504304|gb|AES85507.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 501

 Score =  207 bits (526), Expect(2) = 2e-65
 Identities = 101/137 (73%), Positives = 116/137 (84%), Gaps = 3/137 (2%)
 Frame = -3

Query: 416 VW--QQEGYCHTTNSYHLIMQIFVECEEFKAMWRLVDEMIEKGFPATARTFNILICACDE 243
           VW  QQE Y HT N+YHLIM I+ EC+EFKA+WRLVDEMI KG+ ATARTFNILI  C E
Sbjct: 149 VWCGQQEDYRHTANAYHLIMNIYAECKEFKALWRLVDEMIGKGYKATARTFNILIRTCGE 208

Query: 242 AGIAKKLMVKFMKSKSFNYRPFKHSYNAILHCLLVLNQYKLIEWVYGQMLIE-GLSSDVF 66
           AG+AK L+ +F+KSKSFNYRPFKHSYNAILH  LVLNQYKLIEWVY QML++ G SSD+ 
Sbjct: 209 AGLAKTLVERFIKSKSFNYRPFKHSYNAILHSFLVLNQYKLIEWVYEQMLLDGGFSSDIL 268

Query: 65  TYNIVMLAKYRLGKLNQ 15
           TYNIV+ AKYRLGK++Q
Sbjct: 269 TYNIVIYAKYRLGKVDQ 285



 Score = 68.2 bits (165), Expect(2) = 2e-65
 Identities = 29/44 (65%), Positives = 36/44 (81%)
 Frame = -1

Query: 535 ELRVRPTGLFAREVLYGILREVNCENKTVIAKLAYKFFVWCGSR 404
           EL +RP+G+  REVL+GIL+ +N ENKT  AKLAYKFFVWCG +
Sbjct: 111 ELGIRPSGILVREVLFGILKNINSENKTRCAKLAYKFFVWCGQQ 154


>ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549906|gb|EEF51393.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 475

 Score =  211 bits (536), Expect(2) = 7e-62
 Identities = 96/140 (68%), Positives = 116/140 (82%), Gaps = 2/140 (1%)
 Frame = -3

Query: 416 VW--QQEGYCHTTNSYHLIMQIFVECEEFKAMWRLVDEMIEKGFPATARTFNILICACDE 243
           +W  QQE Y HT N+YHLIM+IF +CEEFKAMWRL+DEM+E GFP TARTFNILIC C  
Sbjct: 142 IWSSQQENYRHTANNYHLIMKIFADCEEFKAMWRLLDEMVENGFPTTARTFNILICTCGG 201

Query: 242 AGIAKKLMVKFMKSKSFNYRPFKHSYNAILHCLLVLNQYKLIEWVYGQMLIEGLSSDVFT 63
           AG+A+K++ +F+KSK+FNYRPFKHSYNAIL  LL + +YKLIEWV+ QML+EG   D  T
Sbjct: 202 AGLARKVVERFIKSKTFNYRPFKHSYNAILLSLLAIREYKLIEWVHQQMLVEGYCPDTLT 261

Query: 62  YNIVMLAKYRLGKLNQFHRM 3
           YNI+M AKYRLGKL+ FHR+
Sbjct: 262 YNILMCAKYRLGKLHHFHRL 281



 Score = 52.4 bits (124), Expect(2) = 7e-62
 Identities = 24/40 (60%), Positives = 29/40 (72%)
 Frame = -1

Query: 535 ELRVRPTGLFAREVLYGILREVNCENKTVIAKLAYKFFVW 416
           EL +R +GL  REVL GILR +  +NKT  AKL YKFF+W
Sbjct: 104 ELDLRVSGLLVREVLAGILRNIGIDNKTRCAKLGYKFFIW 143


>ref|XP_002878314.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297324152|gb|EFH54573.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 475

 Score =  203 bits (516), Expect(2) = 1e-60
 Identities = 94/140 (67%), Positives = 115/140 (82%), Gaps = 2/140 (1%)
 Frame = -3

Query: 416 VWQQEGYC--HTTNSYHLIMQIFVECEEFKAMWRLVDEMIEKGFPATARTFNILICACDE 243
           VW  E  C  HT NSYHL+M+IF EC E+KAMWRLVDEM++ GFP TARTFN+LIC+C E
Sbjct: 139 VWSGEQDCFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGE 198

Query: 242 AGIAKKLMVKFMKSKSFNYRPFKHSYNAILHCLLVLNQYKLIEWVYGQMLIEGLSSDVFT 63
           AG+AK+ +V+FMKSK+FNYRPFKHSYNAIL+ LL + QYKLIEWVY QML +G S DV T
Sbjct: 199 AGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYEQMLEDGFSPDVLT 258

Query: 62  YNIVMLAKYRLGKLNQFHRM 3
           YNI++   YRLGK+++F R+
Sbjct: 259 YNILLWTNYRLGKMDRFDRL 278



 Score = 55.8 bits (133), Expect(2) = 1e-60
 Identities = 26/44 (59%), Positives = 33/44 (75%)
 Frame = -1

Query: 535 ELRVRPTGLFAREVLYGILREVNCENKTVIAKLAYKFFVWCGSR 404
           EL VR +GL  REVL GILR ++ +NKT  A+LAY+FFVW G +
Sbjct: 101 ELNVRVSGLLVREVLVGILRNLSYDNKTRCARLAYRFFVWSGEQ 144