BLASTX nr result

ID: Glycyrrhiza24_contig00026239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026239
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33619.1| unknown [Lotus japonicus]                               71   8e-11
gb|AFK39924.1| unknown [Medicago truncatula]                           70   2e-10

>gb|AFK33619.1| unknown [Lotus japonicus]
          Length = 400

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 44/85 (51%), Positives = 50/85 (58%), Gaps = 13/85 (15%)
 Frame = +2

Query: 2   RTRKRRNCSSV------SAGCSCRTT-------KXXXXXXXXXXXXFDDSCSTESEPPDP 142
           R R+RR  SS       SAGC+CR T                    FDDS S E+E PDP
Sbjct: 98  RRRRRRTASSATPKLVTSAGCNCRPTIESVWIKSNSPPGHSSSHSPFDDS-SAETESPDP 156

Query: 143 EFRTDRVLIPTDSSSFDEMVLLSTS 217
           EFRTDRVL+P++SSSFDEMV LSTS
Sbjct: 157 EFRTDRVLLPSESSSFDEMVSLSTS 181


>gb|AFK39924.1| unknown [Medicago truncatula]
          Length = 382

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 46/81 (56%), Positives = 49/81 (60%), Gaps = 12/81 (14%)
 Frame = +2

Query: 26  SSVSAGCSCRTT-KXXXXXXXXXXXXFDDS---CSTESEPPDPEFRTDRVLIPTDSSSFD 193
           SSVSAGCSCRTT +            F  S     TESE PDPEFRTDRVLIPT+  SFD
Sbjct: 119 SSVSAGCSCRTTLESVWTKSDSPHENFSSSPLDSLTESESPDPEFRTDRVLIPTE-PSFD 177

Query: 194 EMVLLST--------SNNNNN 232
           EMV L+T        SNNNNN
Sbjct: 178 EMVSLTTSSCACNKISNNNNN 198


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