BLASTX nr result

ID: Glycyrrhiza24_contig00026238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026238
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523913.1| PREDICTED: transcription factor GAMYB-like [...   231   6e-59
ref|XP_003541563.1| PREDICTED: transcription factor GAMYB-like [...   229   2e-58
ref|XP_003526354.1| PREDICTED: transcription factor GAMYB-like [...   228   3e-58
ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis...   227   9e-58
ref|XP_002297703.1| predicted protein [Populus trichocarpa] gi|2...   226   2e-57

>ref|XP_003523913.1| PREDICTED: transcription factor GAMYB-like [Glycine max]
          Length = 510

 Score =  231 bits (588), Expect = 6e-59
 Identities = 110/135 (81%), Positives = 118/135 (87%)
 Frame = +1

Query: 34  MSQMTNEIEDDVLCNDQTASQLNDEXXXXXXXXXXLKKGPWTSAEDAILVEYVKKHGEGN 213
           MSQMTNEI  +V CNDQT SQLNDE          LKKGPWT+AED +LV YV+KHGEGN
Sbjct: 1   MSQMTNEINYNVHCNDQTGSQLNDEGNGVGMV---LKKGPWTAAEDVLLVNYVQKHGEGN 57

Query: 214 WNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTSEEEQLIAELHAKMGNKWARMAAHL 393
           WNAVQK+SGLSRCGKSCRLRWANHLRPNLKKGAFT+EEE++IAELHAKMGNKWARMAAHL
Sbjct: 58  WNAVQKYSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEERMIAELHAKMGNKWARMAAHL 117

Query: 394 PGRTDNEIKNYWNTR 438
            GRTDNEIKNYWNTR
Sbjct: 118 HGRTDNEIKNYWNTR 132


>ref|XP_003541563.1| PREDICTED: transcription factor GAMYB-like [Glycine max]
          Length = 595

 Score =  229 bits (584), Expect = 2e-58
 Identities = 109/146 (74%), Positives = 121/146 (82%)
 Frame = +1

Query: 1   ITSYSDTSV*EMSQMTNEIEDDVLCNDQTASQLNDEXXXXXXXXXXLKKGPWTSAEDAIL 180
           + SYS+    +M +M  +IED+VL ND + +QLNDE          LKKGPWTS ED IL
Sbjct: 49  VASYSEAIYYKMRRMKKDIEDEVLPNDMSGAQLNDESYEGSAGIV-LKKGPWTSTEDDIL 107

Query: 181 VEYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTSEEEQLIAELHAKM 360
           V+YVKKHGEGNWNAVQKH+GL RCGKSCRLRWANHLRPNLKKGAF +EEE+LIAELHAKM
Sbjct: 108 VDYVKKHGEGNWNAVQKHTGLFRCGKSCRLRWANHLRPNLKKGAFAAEEERLIAELHAKM 167

Query: 361 GNKWARMAAHLPGRTDNEIKNYWNTR 438
           GNKWARMAAHLPGRTDNEIKNYWNTR
Sbjct: 168 GNKWARMAAHLPGRTDNEIKNYWNTR 193


>ref|XP_003526354.1| PREDICTED: transcription factor GAMYB-like [Glycine max]
          Length = 510

 Score =  228 bits (582), Expect = 3e-58
 Identities = 107/135 (79%), Positives = 120/135 (88%)
 Frame = +1

Query: 34  MSQMTNEIEDDVLCNDQTASQLNDEXXXXXXXXXXLKKGPWTSAEDAILVEYVKKHGEGN 213
           MSQMTNE++++V  +DQT SQLND+          LKKGPWT+AEDA+LV YV+KHGEGN
Sbjct: 1   MSQMTNEVDNNVHYDDQTGSQLNDDGNGVGVV---LKKGPWTAAEDALLVNYVQKHGEGN 57

Query: 214 WNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTSEEEQLIAELHAKMGNKWARMAAHL 393
           WNAVQ +SGLSRCGKSCRLRWANHLRPNLKKGAFT+EEE++IAELHAKMGNKWARMAAHL
Sbjct: 58  WNAVQNYSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEERMIAELHAKMGNKWARMAAHL 117

Query: 394 PGRTDNEIKNYWNTR 438
           PGRTDNEIKNYWNTR
Sbjct: 118 PGRTDNEIKNYWNTR 132


>ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis vinifera]
           gi|298205121|emb|CBI40642.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score =  227 bits (578), Expect = 9e-58
 Identities = 110/137 (80%), Positives = 115/137 (83%), Gaps = 2/137 (1%)
 Frame = +1

Query: 34  MSQMTNEIEDDVLCNDQTASQLNDEXXXXXXXXXX--LKKGPWTSAEDAILVEYVKKHGE 207
           MS +TNE ED +L  DQT S L DE            LKKGPWTS+EDAILVEYVKKHGE
Sbjct: 1   MSHLTNESEDGMLSKDQTGSPLIDEGNSSGSAGGGIVLKKGPWTSSEDAILVEYVKKHGE 60

Query: 208 GNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTSEEEQLIAELHAKMGNKWARMAA 387
           GNWNAVQKHSGL RCGKSCRLRWANHLRPNLKKGAFT+EEE+LI ELHAKMGNKWARMAA
Sbjct: 61  GNWNAVQKHSGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIELHAKMGNKWARMAA 120

Query: 388 HLPGRTDNEIKNYWNTR 438
           HLPGRTDNEIKNYWNTR
Sbjct: 121 HLPGRTDNEIKNYWNTR 137


>ref|XP_002297703.1| predicted protein [Populus trichocarpa] gi|222844961|gb|EEE82508.1|
           predicted protein [Populus trichocarpa]
          Length = 402

 Score =  226 bits (575), Expect = 2e-57
 Identities = 108/136 (79%), Positives = 115/136 (84%), Gaps = 1/136 (0%)
 Frame = +1

Query: 34  MSQMTNEIEDDVLCNDQTASQLNDEXXXXXXXXXX-LKKGPWTSAEDAILVEYVKKHGEG 210
           MS+MT+E ED ++ N+Q  S L +E           LKKGPWTSAEDAIL+EYVKKHGEG
Sbjct: 1   MSRMTSESEDGIVSNNQIESPLGEEGNYCGSANGGVLKKGPWTSAEDAILIEYVKKHGEG 60

Query: 211 NWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTSEEEQLIAELHAKMGNKWARMAAH 390
           NWNAVQKHSGL RCGKSCRLRWANHLRPNLKKGAFT EEEQLI ELHAKMGNKWARMAAH
Sbjct: 61  NWNAVQKHSGLFRCGKSCRLRWANHLRPNLKKGAFTQEEEQLIIELHAKMGNKWARMAAH 120

Query: 391 LPGRTDNEIKNYWNTR 438
           LPGRTDNEIKNYWNTR
Sbjct: 121 LPGRTDNEIKNYWNTR 136


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