BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026228
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...   560   e-157
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   477   e-132
emb|CBI16226.3| unnamed protein product [Vitis vinifera]              474   e-131
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   474   e-131
ref|XP_002300065.1| predicted protein [Populus trichocarpa] gi|2...   448   e-123

>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
            max]
          Length = 1391

 Score =  560 bits (1442), Expect = e-157
 Identities = 272/326 (83%), Positives = 299/326 (91%)
 Frame = -1

Query: 978  CGYSNGSVKKVPSALSIVHDCSKCNNDIVAELQSALSHVREYRATNDLTSRILNPFQVLS 799
            CGY NGSVKK+P++L+I+HDCSKC N IV EL SALS +++ RAT ++++RILNPFQVLS
Sbjct: 168  CGYINGSVKKLPASLTIIHDCSKCRNYIVEELDSALSRMKDSRATTNVSNRILNPFQVLS 227

Query: 798  LFRRMCDEDCELLYVADRPEKLIITNISVPPIAIRPSVIMDGSQSNEDDITERLKKIIQA 619
            LF+RM DEDCELLYVA+RPEKLI+TN+ VPPIAIRPSV+MD S SNE+DITERLK IIQA
Sbjct: 228  LFKRMLDEDCELLYVAERPEKLIMTNVVVPPIAIRPSVVMDESLSNENDITERLKNIIQA 287

Query: 618  NAVLRQELQESSGSLRFLDGWDMLQFEVAQFINSDVRGVPYLMQSTKPLAGFVQRLKGKQ 439
            NAVLRQELQES+ S +FLDGWD+LQ EVAQFINSDVRG+P+ MQ TK LAGFVQRLKGK 
Sbjct: 288  NAVLRQELQESTFSSKFLDGWDILQNEVAQFINSDVRGIPFYMQPTKQLAGFVQRLKGKH 347

Query: 438  GRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVR 259
            GRFRGNLSGKRVEYTGRTVISPDPNLKI+EVAIPIHMARILTYPERVTHHNIEKLRQCVR
Sbjct: 348  GRFRGNLSGKRVEYTGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVR 407

Query: 258  NGPDKYPGARLLTHAGGPSWSLKVSCRKRLADELKFGDIVDRHLEDGDIVLFNRQPSLHR 79
            NGPDKYPGAR+L   GG SWSLKV CRKR ADEL+ GDIVDRHLEDGDIVLFNRQPSLHR
Sbjct: 408  NGPDKYPGARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHR 467

Query: 78   MSMMCHRARIMPWRTLRFNESVCNPY 1
            MS+MCHRARIMPWRTLRFNESVCNPY
Sbjct: 468  MSIMCHRARIMPWRTLRFNESVCNPY 493


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  477 bits (1227), Expect = e-132
 Identities = 237/327 (72%), Positives = 274/327 (83%), Gaps = 1/327 (0%)
 Frame = -1

Query: 978  CGYSNGSVKKVPSALSIVHDCSKCNN-DIVAELQSALSHVREYRATNDLTSRILNPFQVL 802
            CGY NGSVKK  S L I+H  ++  +  +V+E         + RA  ++++ ILNPF+VL
Sbjct: 173  CGYLNGSVKKAVSMLGILHYRARSKDAGVVSE---------DLRAPYNVSNDILNPFRVL 223

Query: 801  SLFRRMCDEDCELLYVADRPEKLIITNISVPPIAIRPSVIMDGSQSNEDDITERLKKIIQ 622
             LF+RM DEDCELL++++RPEKLIITN+ VPPIAIRPSVIMDGSQSNE+DITERLK+IIQ
Sbjct: 224  CLFQRMSDEDCELLFLSNRPEKLIITNVLVPPIAIRPSVIMDGSQSNENDITERLKRIIQ 283

Query: 621  ANAVLRQELQESSGSLRFLDGWDMLQFEVAQFINSDVRGVPYLMQSTKPLAGFVQRLKGK 442
             NA + QEL  S+   + L+ WDMLQ EVAQ INSDVRG+P+ MQ +KPLAGFVQRLKGK
Sbjct: 284  QNASVSQELSTSNSQAKCLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGK 343

Query: 441  QGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCV 262
            QGRFRGNL GKRVE+TGRTVISPDPNLKITEVA+PIHMARILTYPERVT HNIEKLRQCV
Sbjct: 344  QGRFRGNLCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCV 403

Query: 261  RNGPDKYPGARLLTHAGGPSWSLKVSCRKRLADELKFGDIVDRHLEDGDIVLFNRQPSLH 82
             NGPDKYPGAR+L H  G   SL +S RKRLADELK+G+IV+RHLEDGD+VLFNRQPSLH
Sbjct: 404  SNGPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLH 463

Query: 81   RMSMMCHRARIMPWRTLRFNESVCNPY 1
            RMS+MCHR R+MPWRTLRFNESVCNPY
Sbjct: 464  RMSIMCHRVRVMPWRTLRFNESVCNPY 490


>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
          Length = 1819

 Score =  474 bits (1221), Expect = e-131
 Identities = 236/327 (72%), Positives = 274/327 (83%), Gaps = 1/327 (0%)
 Frame = -1

Query: 978  CGYSNGSVKKVPSALSIVHDCSKCNNDIVAELQSALSHVREYRATNDLTSRILNPFQVLS 799
            CGY NG VKK  S L I+HD SK  +  + E  SA+SH +E +A+  +   ILNP +VLS
Sbjct: 169  CGYMNGIVKKAVSVLGIIHDRSKIADGSLEECSSAISHTKESKASFSVVD-ILNPVKVLS 227

Query: 798  LFRRMCDEDCELLYVADRPEKLIITNISVPPIAIRPSVIMDG-SQSNEDDITERLKKIIQ 622
            LF+RM DEDC+LL +A+RPEKL++TNI VPPIAIRPSV MDG +QSNE+D+TERLK+IIQ
Sbjct: 228  LFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQ 287

Query: 621  ANAVLRQELQESSGSLRFLDGWDMLQFEVAQFINSDVRGVPYLMQSTKPLAGFVQRLKGK 442
            ANA L QELQ++  + + L GWD LQ EVAQ+INSDVRGVP  MQ+ +PL+GFVQRLKGK
Sbjct: 288  ANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGK 347

Query: 441  QGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCV 262
            QGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPI MA+IL+YPERV+HHNIEKLRQC+
Sbjct: 348  QGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCI 407

Query: 261  RNGPDKYPGARLLTHAGGPSWSLKVSCRKRLADELKFGDIVDRHLEDGDIVLFNRQPSLH 82
             NGP KYPGA+L+ +  G   SL  S RKR ADELK+G IV+RHLEDGD+VLFNRQPSLH
Sbjct: 408  LNGPFKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLH 467

Query: 81   RMSMMCHRARIMPWRTLRFNESVCNPY 1
            RMS+MCHRARIMPWRTLRFNESVCNPY
Sbjct: 468  RMSIMCHRARIMPWRTLRFNESVCNPY 494


>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  474 bits (1221), Expect = e-131
 Identities = 236/327 (72%), Positives = 274/327 (83%), Gaps = 1/327 (0%)
 Frame = -1

Query: 978  CGYSNGSVKKVPSALSIVHDCSKCNNDIVAELQSALSHVREYRATNDLTSRILNPFQVLS 799
            CGY NG VKK  S L I+HD SK  +  + E  SA+SH +E +A+  +   ILNP +VLS
Sbjct: 169  CGYMNGIVKKAVSVLGIIHDRSKIADGSLEECSSAISHTKESKASFSVVD-ILNPVKVLS 227

Query: 798  LFRRMCDEDCELLYVADRPEKLIITNISVPPIAIRPSVIMDG-SQSNEDDITERLKKIIQ 622
            LF+RM DEDC+LL +A+RPEKL++TNI VPPIAIRPSV MDG +QSNE+D+TERLK+IIQ
Sbjct: 228  LFKRMMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQ 287

Query: 621  ANAVLRQELQESSGSLRFLDGWDMLQFEVAQFINSDVRGVPYLMQSTKPLAGFVQRLKGK 442
            ANA L QELQ++  + + L GWD LQ EVAQ+INSDVRGVP  MQ+ +PL+GFVQRLKGK
Sbjct: 288  ANASLHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGK 347

Query: 441  QGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCV 262
            QGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPI MA+IL+YPERV+HHNIEKLRQC+
Sbjct: 348  QGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCI 407

Query: 261  RNGPDKYPGARLLTHAGGPSWSLKVSCRKRLADELKFGDIVDRHLEDGDIVLFNRQPSLH 82
             NGP KYPGA+L+ +  G   SL  S RKR ADELK+G IV+RHLEDGD+VLFNRQPSLH
Sbjct: 408  LNGPFKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLH 467

Query: 81   RMSMMCHRARIMPWRTLRFNESVCNPY 1
            RMS+MCHRARIMPWRTLRFNESVCNPY
Sbjct: 468  RMSIMCHRARIMPWRTLRFNESVCNPY 494


>ref|XP_002300065.1| predicted protein [Populus trichocarpa] gi|222847323|gb|EEE84870.1|
            predicted protein [Populus trichocarpa]
          Length = 1394

 Score =  448 bits (1152), Expect = e-123
 Identities = 230/327 (70%), Positives = 264/327 (80%), Gaps = 1/327 (0%)
 Frame = -1

Query: 978  CGYSNGSVKKVPSALSIVHDCSKCNNDIVAELQSALSHVREYRATNDLTSRILNPFQVLS 799
            CGY NG VKK  S + I+HD SK  +  + E +SA+ H RE RA   L + ILNP +VLS
Sbjct: 171  CGYMNGMVKKAGSVVGIIHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLS 230

Query: 798  LFRRMCDEDCELLYVADRPEKLIITNISVPPIAIRPSVIMDGSQSNEDDITERLKKIIQA 619
            LF+RM +EDCELLY+  RPEKLIIT I+VPPI+IRPSV  +GSQSNE+DITERLK+IIQ 
Sbjct: 231  LFQRMVEEDCELLYLQGRPEKLIITTIAVPPISIRPSVFTEGSQSNENDITERLKQIIQF 290

Query: 618  NAVLRQELQESSGS-LRFLDGWDMLQFEVAQFINSDVRGVPYLMQSTKPLAGFVQRLKGK 442
            NA LR EL E   + +++L GWD LQ  V  +INSDVR +P  MQ  +PL+GFVQRL GK
Sbjct: 291  NAKLRLELLEGRRTGIKYLIGWDELQAVVTLYINSDVR-IPLDMQVGRPLSGFVQRLTGK 349

Query: 441  QGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCV 262
            QGRFR NL+GKRVE+TGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCV
Sbjct: 350  QGRFRQNLAGKRVEFTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCV 409

Query: 261  RNGPDKYPGARLLTHAGGPSWSLKVSCRKRLADELKFGDIVDRHLEDGDIVLFNRQPSLH 82
             NG  KYPGAR++T+  G S  L  + RKR+A+ELK G IV RHLEDGD+VLFNRQPSLH
Sbjct: 410  NNGSYKYPGARMVTYPDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLH 469

Query: 81   RMSMMCHRARIMPWRTLRFNESVCNPY 1
            RMS+MCHRARIMPWRTLRFNESVCNPY
Sbjct: 470  RMSIMCHRARIMPWRTLRFNESVCNPY 496