BLASTX nr result

ID: Glycyrrhiza24_contig00026202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026202
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat...   161   6e-38
ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containi...   154   9e-36
ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containi...   153   1e-35
ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containi...   150   8e-35

>ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  161 bits (407), Expect = 6e-38
 Identities = 73/92 (79%), Positives = 86/92 (93%)
 Frame = -1

Query: 276 MKHFPTAISLSQQIDVTGIEPDIFTFNILINCYCHLGQMTFAFSVLGKILKMGYQPNIIT 97
           MKH+PTAISL +Q+ V GIEPD+FT NILINC+CHLGQMTF+F+VLGKILK+GYQPN IT
Sbjct: 23  MKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTIT 82

Query: 96  LNTLIKGLCLKSEVQKALHFHDEVVAQGFQLD 1
           LNTL+KGLCLK EV+K+LHFHD+VVAQGFQ+D
Sbjct: 83  LNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMD 114



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/82 (32%), Positives = 48/82 (58%)
 Frame = -1

Query: 258 AISLSQQIDVTGIEPDIFTFNILINCYCHLGQMTFAFSVLGKILKMGYQPNIITLNTLIK 79
           A  L  ++ +  I P+++T+ IL++  C  G++  A ++L  + K G +PN+++ NTL+ 
Sbjct: 204 AFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMD 263

Query: 78  GLCLKSEVQKALHFHDEVVAQG 13
           G CL  EVQ A      +V +G
Sbjct: 264 GYCLIGEVQNAKQMFHTMVQKG 285


>ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  154 bits (388), Expect = 9e-36
 Identities = 69/92 (75%), Positives = 86/92 (93%)
 Frame = -1

Query: 276 MKHFPTAISLSQQIDVTGIEPDIFTFNILINCYCHLGQMTFAFSVLGKILKMGYQPNIIT 97
           MKH+PTAISLS+Q++V GIEP++ T NILINC+CHLGQM F+FSVLGKILK+GYQP+ IT
Sbjct: 78  MKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTIT 137

Query: 96  LNTLIKGLCLKSEVQKALHFHDEVVAQGFQLD 1
           LNTL+KGLCLK EV+++LHFHD+VVAQGFQ++
Sbjct: 138 LNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMN 169


>ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  153 bits (387), Expect = 1e-35
 Identities = 70/92 (76%), Positives = 84/92 (91%)
 Frame = -1

Query: 276 MKHFPTAISLSQQIDVTGIEPDIFTFNILINCYCHLGQMTFAFSVLGKILKMGYQPNIIT 97
           MKHFPTAISLS+Q++V GIEPD+ T +ILINC+CHLGQM F+FSVLGKILK+GYQPN I 
Sbjct: 145 MKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTII 204

Query: 96  LNTLIKGLCLKSEVQKALHFHDEVVAQGFQLD 1
           L TL+KGLCLK EV+K+LHFHD+VVAQGFQ++
Sbjct: 205 LTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMN 236



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/50 (72%), Positives = 42/50 (84%)
 Frame = -1

Query: 225 GIEPDIFTFNILINCYCHLGQMTFAFSVLGKILKMGYQPNIITLNTLIKG 76
           GI P++ T +ILINC  HLGQM F+FSVLGKILK+GYQPN ITL TL+KG
Sbjct: 6   GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMKG 55



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/71 (39%), Positives = 45/71 (63%)
 Frame = -1

Query: 258 AISLSQQIDVTGIEPDIFTFNILINCYCHLGQMTFAFSVLGKILKMGYQPNIITLNTLIK 79
           A SL  ++ +  I PD++T+ ILI+  C  G++  A ++LG + K G +PN++T +TL+ 
Sbjct: 326 AFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMD 385

Query: 78  GLCLKSEVQKA 46
           G CL  EV  A
Sbjct: 386 GYCLVGEVHNA 396


>ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  152 bits (384), Expect = 3e-35
 Identities = 69/92 (75%), Positives = 85/92 (92%)
 Frame = -1

Query: 276 MKHFPTAISLSQQIDVTGIEPDIFTFNILINCYCHLGQMTFAFSVLGKILKMGYQPNIIT 97
           MKH+ TAISLS+Q++V GIEP++ T NILINC+CHLGQM+F+FSVLGKILK+GYQPN IT
Sbjct: 65  MKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTIT 124

Query: 96  LNTLIKGLCLKSEVQKALHFHDEVVAQGFQLD 1
           L TL+KGLCLK EVQK++HFHD+VVAQGFQ++
Sbjct: 125 LTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMN 156


>ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  150 bits (380), Expect = 8e-35
 Identities = 68/92 (73%), Positives = 82/92 (89%)
 Frame = -1

Query: 276 MKHFPTAISLSQQIDVTGIEPDIFTFNILINCYCHLGQMTFAFSVLGKILKMGYQPNIIT 97
           MKH+PT ISLS+Q++  GI PD+ T +ILINC+CHLGQM F+FSVLGKILK+GYQPN I 
Sbjct: 23  MKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTII 82

Query: 96  LNTLIKGLCLKSEVQKALHFHDEVVAQGFQLD 1
           LNTL+KGLCLK EV+K+LHFHD+VVAQGFQ+D
Sbjct: 83  LNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMD 114



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/86 (32%), Positives = 48/86 (55%)
 Frame = -1

Query: 258 AISLSQQIDVTGIEPDIFTFNILINCYCHLGQMTFAFSVLGKILKMGYQPNIITLNTLIK 79
           A  L  +++  GI PD+ T+  LI  +C  GQ+  AF +L +++     PNI T NTLI 
Sbjct: 169 AYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLID 228

Query: 78  GLCLKSEVQKALHFHDEVVAQGFQLD 1
            LC + +V+++ +    +  +G + D
Sbjct: 229 TLCKEGKVKESKNLLAVMTKKGVKPD 254


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