BLASTX nr result

ID: Glycyrrhiza24_contig00026200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026200
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   171   4e-41
ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   171   6e-41
ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   152   2e-35
ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putativ...   150   1e-34

>ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine
           max]
          Length = 528

 Score =  171 bits (434), Expect = 4e-41
 Identities = 86/97 (88%), Positives = 91/97 (93%)
 Frame = -3

Query: 293 ATMSNDLEKMANSLAKDTVVISVGEPNRPNKAVKQLAIWVESKQKKQKLFDILTSNKHFK 114
           ATMSNDLEKM N+LAK  VV+S+GEPN PNKAVKQLAIWVESKQKKQKLF+IL S KHFK
Sbjct: 315 ATMSNDLEKMINTLAKGMVVMSIGEPNTPNKAVKQLAIWVESKQKKQKLFEILASKKHFK 374

Query: 113 PPVVIYVGSRLGADLLANAITVATGIKAVSIHGEKSM 3
           PPVV+YVGSRLGADLLANAITVATGIKAVSIHGEKSM
Sbjct: 375 PPVVVYVGSRLGADLLANAITVATGIKAVSIHGEKSM 411


>ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine
           max]
          Length = 528

 Score =  171 bits (433), Expect = 6e-41
 Identities = 86/97 (88%), Positives = 91/97 (93%)
 Frame = -3

Query: 293 ATMSNDLEKMANSLAKDTVVISVGEPNRPNKAVKQLAIWVESKQKKQKLFDILTSNKHFK 114
           ATMSNDLEKM N+L K TVVISVGEPN PNKAVKQLAIWVESK+KKQKLF+IL S KHFK
Sbjct: 315 ATMSNDLEKMINTLVKGTVVISVGEPNTPNKAVKQLAIWVESKEKKQKLFEILESKKHFK 374

Query: 113 PPVVIYVGSRLGADLLANAITVATGIKAVSIHGEKSM 3
           PPVV+YVGSRLGADLLANAITV+TGIKAVSIHGEKSM
Sbjct: 375 PPVVVYVGSRLGADLLANAITVSTGIKAVSIHGEKSM 411


>ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|222861172|gb|EEE98714.1|
           predicted protein [Populus trichocarpa]
          Length = 524

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/97 (75%), Positives = 89/97 (91%)
 Frame = -3

Query: 293 ATMSNDLEKMANSLAKDTVVISVGEPNRPNKAVKQLAIWVESKQKKQKLFDILTSNKHFK 114
           ATMS ++EKMA+S+AKD + +S+G+PNRP+KAVKQLAIWVESKQKKQKLFDIL S +HF 
Sbjct: 311 ATMSQEVEKMASSMAKDLIFVSIGQPNRPSKAVKQLAIWVESKQKKQKLFDILMSKQHFL 370

Query: 113 PPVVIYVGSRLGADLLANAITVATGIKAVSIHGEKSM 3
           PP ++YVGSR+GADLL+NAITV TG+KA+SIHGEKSM
Sbjct: 371 PPSIVYVGSRIGADLLSNAITVTTGLKALSIHGEKSM 407


>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
           vinifera]
          Length = 540

 Score =  152 bits (385), Expect = 2e-35
 Identities = 74/97 (76%), Positives = 88/97 (90%)
 Frame = -3

Query: 293 ATMSNDLEKMANSLAKDTVVISVGEPNRPNKAVKQLAIWVESKQKKQKLFDILTSNKHFK 114
           AT+S ++EK+A+S+AKD +VISVG+ NRPN AVKQLAIWVESKQKKQKLFDILTS +HF 
Sbjct: 324 ATISQEVEKVASSMAKDIIVISVGKSNRPNIAVKQLAIWVESKQKKQKLFDILTSKQHFT 383

Query: 113 PPVVIYVGSRLGADLLANAITVATGIKAVSIHGEKSM 3
           PPVV++VGSRLGADLL  AIT+ TG+KA+SIHGEKSM
Sbjct: 384 PPVVVFVGSRLGADLLTEAITITTGLKALSIHGEKSM 420


>ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547805|gb|EEF49297.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 514

 Score =  150 bits (379), Expect = 1e-34
 Identities = 71/97 (73%), Positives = 87/97 (89%)
 Frame = -3

Query: 293 ATMSNDLEKMANSLAKDTVVISVGEPNRPNKAVKQLAIWVESKQKKQKLFDILTSNKHFK 114
           AT++ ++EKMA+S+AKD  ++S+G+PNRP+KAVKQLAIWVE KQKKQKLFDIL S +HF 
Sbjct: 306 ATVTQEVEKMASSMAKDMALVSIGQPNRPSKAVKQLAIWVEPKQKKQKLFDILMSKQHFM 365

Query: 113 PPVVIYVGSRLGADLLANAITVATGIKAVSIHGEKSM 3
           PP V+YVGSRLGADLL+NAITV TG K++SIHGEKSM
Sbjct: 366 PPAVVYVGSRLGADLLSNAITVTTGWKSLSIHGEKSM 402


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