BLASTX nr result

ID: Glycyrrhiza24_contig00026194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026194
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Me...   146   1e-33
ref|XP_003516665.1| PREDICTED: uncharacterized protein LOC100795...   135   3e-30
ref|XP_003516666.1| PREDICTED: uncharacterized protein LOC100795...   132   4e-29
ref|XP_003538736.1| PREDICTED: uncharacterized protein LOC100810...   129   2e-28
ref|XP_003538737.1| PREDICTED: uncharacterized protein LOC100811...   128   5e-28

>ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509760|gb|AES90902.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1523

 Score =  146 bits (369), Expect = 1e-33
 Identities = 75/121 (61%), Positives = 82/121 (67%)
 Frame = +2

Query: 2    RQAKLGEKNKFYYDEKLKRWXXXXXXXXXXXXXXXXXXXXXXFQNGLTEHNLKSALKTEG 181
            +QAKLGEKNKFYYDE LKRW                      FQNGLTE+NL+SALKTEG
Sbjct: 1200 KQAKLGEKNKFYYDENLKRWVEEGAAPPAEETALPPPPTTAAFQNGLTEYNLQSALKTEG 1259

Query: 182  SPFKEGSDLKTSSPELTXXXXXXXXSTIQLSARGRIGVRSRYVDTFNQGDGSSTNLFQSP 361
             P KEGSDLKTS+PELT         T   SARGR+G+RSRYVDTFNQG G+S NLFQSP
Sbjct: 1260 PPSKEGSDLKTSNPELTPGIPPIPPGTNHFSARGRVGIRSRYVDTFNQGGGNSANLFQSP 1319

Query: 362  S 364
            S
Sbjct: 1320 S 1320


>ref|XP_003516665.1| PREDICTED: uncharacterized protein LOC100795053 [Glycine max]
          Length = 1424

 Score =  135 bits (340), Expect = 3e-30
 Identities = 73/122 (59%), Positives = 83/122 (68%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2    RQAKLGEKNKFYYDEKLKRWXXXXXXXXXXXXXXXXXXXXXX-FQNGLTEHNLKSALKTE 178
            RQAKLGEKNKFYYDEKLKRW                       FQNG TE+NL+SALKTE
Sbjct: 1151 RQAKLGEKNKFYYDEKLKRWVEEGAELPAEEAAALPPPPTTAAFQNGSTEYNLRSALKTE 1210

Query: 179  GSPFKEGSDLKTSSPELTXXXXXXXXSTIQLSARGRIGVRSRYVDTFNQGDGSSTNLFQS 358
             SP  EGS+++T+SPEL+        S+ Q SARGR+GVRSRYVDTFNQG G+S NLFQS
Sbjct: 1211 SSPPIEGSNIRTASPELSPGMPPIPPSSNQFSARGRLGVRSRYVDTFNQGGGTSANLFQS 1270

Query: 359  PS 364
            PS
Sbjct: 1271 PS 1272


>ref|XP_003516666.1| PREDICTED: uncharacterized protein LOC100795588 [Glycine max]
          Length = 1404

 Score =  132 bits (331), Expect = 4e-29
 Identities = 72/122 (59%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2    RQAKLGEKNKFYYDEKLKRWXXXXXXXXXXXXXXXXXXXXXX-FQNGLTEHNLKSALKTE 178
            RQAKLGEKNKFYYDEKLKRW                       FQNG  E+NL+SALKTE
Sbjct: 1143 RQAKLGEKNKFYYDEKLKRWVEEGAELPAEEAAALPPPPTTAAFQNGSAEYNLRSALKTE 1202

Query: 179  GSPFKEGSDLKTSSPELTXXXXXXXXSTIQLSARGRIGVRSRYVDTFNQGDGSSTNLFQS 358
             SP  EGS+++TSSPEL+        S  Q SARGR+GVRSRYVDTFNQG G+S NLFQ 
Sbjct: 1203 SSPPIEGSNIRTSSPELSPGMPPIPPSANQFSARGRLGVRSRYVDTFNQGGGTSANLFQF 1262

Query: 359  PS 364
            PS
Sbjct: 1263 PS 1264


>ref|XP_003538736.1| PREDICTED: uncharacterized protein LOC100810562 [Glycine max]
          Length = 1420

 Score =  129 bits (324), Expect = 2e-28
 Identities = 71/122 (58%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2    RQAKLGEKNKFYYDEKLKRWXXXXXXXXXXXXXXXXXXXXXX-FQNGLTEHNLKSALKTE 178
            RQAKLG+KNKFYYDEKLKRW                       FQNG TE+NL+SALKTE
Sbjct: 1156 RQAKLGDKNKFYYDEKLKRWVEEGAEVPAEEAAALTPPPTTAAFQNGSTEYNLRSALKTE 1215

Query: 179  GSPFKEGSDLKTSSPELTXXXXXXXXSTIQLSARGRIGVRSRYVDTFNQGDGSSTNLFQS 358
             SP  EGS ++TSS EL+        S  Q SARGR+GVRSRYVDTFNQG G+S NLF+S
Sbjct: 1216 SSPPIEGSSIRTSSLELSPGMPLIPPSANQFSARGRLGVRSRYVDTFNQGGGTSANLFRS 1275

Query: 359  PS 364
            PS
Sbjct: 1276 PS 1277


>ref|XP_003538737.1| PREDICTED: uncharacterized protein LOC100811102 [Glycine max]
          Length = 1423

 Score =  128 bits (321), Expect = 5e-28
 Identities = 70/122 (57%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2    RQAKLGEKNKFYYDEKLKRWXXXXXXXXXXXXXXXXXXXXXX-FQNGLTEHNLKSALKTE 178
            RQAKLGEKNKFYYDEKLKRW                       FQNG TE+N + ALKTE
Sbjct: 1150 RQAKLGEKNKFYYDEKLKRWVEEGAEVPAEEASALPPPPTTAAFQNGSTEYNSRFALKTE 1209

Query: 179  GSPFKEGSDLKTSSPELTXXXXXXXXSTIQLSARGRIGVRSRYVDTFNQGDGSSTNLFQS 358
             SP  EGS+++T+SPEL+        S  Q  ARGR+GVRSRYVDTFNQG G+S NLFQS
Sbjct: 1210 SSPPIEGSNIRTASPELSPGMPPIPPSANQFLARGRLGVRSRYVDTFNQGGGTSANLFQS 1269

Query: 359  PS 364
            PS
Sbjct: 1270 PS 1271


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