BLASTX nr result

ID: Glycyrrhiza24_contig00026175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026175
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAI64810.1| nucleoporin [Lotus japonicus] gi|83423284|emb|CA...   236   2e-60
ref|XP_003617946.1| Nucleoporin [Medicago truncatula] gi|3555192...   233   1e-59
ref|XP_003519660.1| PREDICTED: uncharacterized protein LOC100793...   221   7e-56
ref|XP_003544458.1| PREDICTED: uncharacterized protein LOC100780...   220   9e-56
emb|CBI28417.3| unnamed protein product [Vitis vinifera]              165   5e-39

>emb|CAI64810.1| nucleoporin [Lotus japonicus] gi|83423284|emb|CAI64811.1|
           nucleoporin [Lotus japonicus]
          Length = 1309

 Score =  236 bits (601), Expect = 2e-60
 Identities = 121/151 (80%), Positives = 130/151 (86%), Gaps = 1/151 (0%)
 Frame = -1

Query: 452 MFSCGTKKKSNA-REQGRGHTTLFDSPVTTPLRSSFNDNAVPNRPPTGTPAPWTPRLSVL 276
           MFSCGTKK + A R+Q R  + L DSPVT PLRSS    AVPNRPPTGTPAPWTPRLSVL
Sbjct: 1   MFSCGTKKNNGASRDQARASSVL-DSPVTPPLRSS----AVPNRPPTGTPAPWTPRLSVL 55

Query: 275 ARVPQVNRSGKEDNTDPIKPVFVSEFPQVVRDEQATSLHTRVPVEDCAASGGIDKSTSLA 96
           ARVPQVNR+GKEDNTDPIKPVFV+EFPQVVRDEQA  LH RVPVE C ASGGIDKSTSLA
Sbjct: 56  ARVPQVNRTGKEDNTDPIKPVFVAEFPQVVRDEQAALLHKRVPVEGC-ASGGIDKSTSLA 114

Query: 95  WIVCGSKVFVWSYLSPASSMNCVVLEIPLND 3
           WI+ G++VF+WSYLSPASSM CVVLEIP ND
Sbjct: 115 WIISGNRVFIWSYLSPASSMKCVVLEIPFND 145


>ref|XP_003617946.1| Nucleoporin [Medicago truncatula] gi|355519281|gb|AET00905.1|
           Nucleoporin [Medicago truncatula]
          Length = 1308

 Score =  233 bits (595), Expect = 1e-59
 Identities = 120/152 (78%), Positives = 127/152 (83%), Gaps = 2/152 (1%)
 Frame = -1

Query: 452 MFSCGTKKKSNAREQGRGHTTLFDSPVT-TPLR-SSFNDNAVPNRPPTGTPAPWTPRLSV 279
           MFS G KKK N     R   TL DSPVT +PLR +SFND A+PNRPPTGTPAPWTPRLSV
Sbjct: 1   MFSTGPKKKKN---NPRTPPTLSDSPVTPSPLRRTSFNDTAIPNRPPTGTPAPWTPRLSV 57

Query: 278 LARVPQVNRSGKEDNTDPIKPVFVSEFPQVVRDEQATSLHTRVPVEDCAASGGIDKSTSL 99
           LARVPQVNR+GKED+ DPIKPVFVSEFP+VV DEQATSL  RV  EDC   GGIDKSTSL
Sbjct: 58  LARVPQVNRNGKEDDNDPIKPVFVSEFPKVVCDEQATSLQRRVSFEDCGGYGGIDKSTSL 117

Query: 98  AWIVCGSKVFVWSYLSPASSMNCVVLEIPLND 3
           AWI+CGSKVFVWSYLSPASSMNCVVLEIP ND
Sbjct: 118 AWIICGSKVFVWSYLSPASSMNCVVLEIPFND 149


>ref|XP_003519660.1| PREDICTED: uncharacterized protein LOC100793167 [Glycine max]
          Length = 1312

 Score =  221 bits (562), Expect = 7e-56
 Identities = 110/152 (72%), Positives = 126/152 (82%), Gaps = 2/152 (1%)
 Frame = -1

Query: 452 MFSCGTKKKS--NAREQGRGHTTLFDSPVTTPLRSSFNDNAVPNRPPTGTPAPWTPRLSV 279
           MFSCGTKK +  + REQGR  +T+ DSPVT P R+SF+DNAVPNRP TGTP PW PRLSV
Sbjct: 1   MFSCGTKKSNVRSRREQGRD-STVVDSPVT-PARTSFHDNAVPNRPTTGTPVPWAPRLSV 58

Query: 278 LARVPQVNRSGKEDNTDPIKPVFVSEFPQVVRDEQATSLHTRVPVEDCAASGGIDKSTSL 99
           LARVPQVNR+GK D+TDP KPVFV EFPQVVRDEQ+  LH R+P ED    GGIDKSTSL
Sbjct: 59  LARVPQVNRTGKGDDTDPTKPVFVGEFPQVVRDEQSILLHNRIPAED-RVCGGIDKSTSL 117

Query: 98  AWIVCGSKVFVWSYLSPASSMNCVVLEIPLND 3
           AWI+CG++V++W YLSPASS+ C VLEIPLND
Sbjct: 118 AWIICGNRVYLWCYLSPASSVKCAVLEIPLND 149


>ref|XP_003544458.1| PREDICTED: uncharacterized protein LOC100780148 [Glycine max]
          Length = 1315

 Score =  220 bits (561), Expect = 9e-56
 Identities = 112/152 (73%), Positives = 127/152 (83%), Gaps = 2/152 (1%)
 Frame = -1

Query: 452 MFSCGTKKKS--NAREQGRGHTTLFDSPVTTPLRSSFNDNAVPNRPPTGTPAPWTPRLSV 279
           MFSCGTKK +  + R QGR  +T+ DSPVT P R+SF+DN VPNRP TGTPAPW PRLSV
Sbjct: 1   MFSCGTKKSNVRSRRLQGRD-STVVDSPVT-PARTSFHDNGVPNRPTTGTPAPWAPRLSV 58

Query: 278 LARVPQVNRSGKEDNTDPIKPVFVSEFPQVVRDEQATSLHTRVPVEDCAASGGIDKSTSL 99
           LARVPQVNRSGK D+TDP KPVFV EFPQVVRDEQ   LH R+P ED  A GGIDKSTSL
Sbjct: 59  LARVPQVNRSGKGDDTDPTKPVFVGEFPQVVRDEQNILLHKRIPAED-HACGGIDKSTSL 117

Query: 98  AWIVCGSKVFVWSYLSPASSMNCVVLEIPLND 3
           AWI+CG++V++WSYLSPASS+ CVVL+IPLND
Sbjct: 118 AWIICGNRVYLWSYLSPASSVKCVVLKIPLND 149


>emb|CBI28417.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score =  165 bits (417), Expect = 5e-39
 Identities = 80/153 (52%), Positives = 108/153 (70%), Gaps = 3/153 (1%)
 Frame = -1

Query: 452 MFSCGTKKKSNAREQGRGHTTLFDSPVTTPL---RSSFNDNAVPNRPPTGTPAPWTPRLS 282
           MFS  TK+ + +  + R       +   TPL   R S N+N++PNRP TGTPAPWT RLS
Sbjct: 1   MFSPATKRPNFSSRKDRNLGQAVPNSPITPLTENRRSLNENSIPNRPSTGTPAPWTSRLS 60

Query: 281 VLARVPQVNRSGKEDNTDPIKPVFVSEFPQVVRDEQATSLHTRVPVEDCAASGGIDKSTS 102
           V AR+PQ+ +S K D  DP++PV+V EFPQVVRDEQA+ L  RVP  D +  GG+DK T+
Sbjct: 61  VYARIPQLKKSEKGDEIDPVQPVYVGEFPQVVRDEQASFLQKRVP-GDASIFGGMDKGTA 119

Query: 101 LAWIVCGSKVFVWSYLSPASSMNCVVLEIPLND 3
           L+WI+CG+K+F+WSYL+  +S  CVVLE+P ++
Sbjct: 120 LSWIICGNKLFIWSYLTSVASKKCVVLELPSDE 152


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