BLASTX nr result
ID: Glycyrrhiza24_contig00026166
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00026166 (283 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|35551... 147 7e-34 ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|35551... 147 7e-34 ref|XP_002314471.1| hypothetical protein POPTRDRAFT_565766 [Popu... 61 1e-07 ref|XP_002516857.1| conserved hypothetical protein [Ricinus comm... 59 5e-07 >ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|355510630|gb|AES91772.1| Helicase swr1 [Medicago truncatula] Length = 3310 Score = 147 bits (372), Expect = 7e-34 Identities = 73/91 (80%), Positives = 78/91 (85%) Frame = -1 Query: 283 APGKQQGAYAKVHGGMAVSASASPMTEPVFSSSMQYGGALERDGGISTALADGHKISQIG 104 APGKQQGAYA+VHGGM V A+ S M EPVFSSSMQYG L RDGG S LADGH+ISQIG Sbjct: 319 APGKQQGAYARVHGGMVVPANVSAMNEPVFSSSMQYGVPLNRDGGSSNTLADGHQISQIG 378 Query: 103 RQNSGSEMTMLRQGVPPRDTGKSTVPAAPAS 11 RQNSGSEMTMLRQGVPPRDTGKS VPAA ++ Sbjct: 379 RQNSGSEMTMLRQGVPPRDTGKSPVPAASST 409 >ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|355510629|gb|AES91771.1| Helicase swr1 [Medicago truncatula] Length = 3312 Score = 147 bits (372), Expect = 7e-34 Identities = 73/91 (80%), Positives = 78/91 (85%) Frame = -1 Query: 283 APGKQQGAYAKVHGGMAVSASASPMTEPVFSSSMQYGGALERDGGISTALADGHKISQIG 104 APGKQQGAYA+VHGGM V A+ S M EPVFSSSMQYG L RDGG S LADGH+ISQIG Sbjct: 319 APGKQQGAYARVHGGMVVPANVSAMNEPVFSSSMQYGVPLNRDGGSSNTLADGHQISQIG 378 Query: 103 RQNSGSEMTMLRQGVPPRDTGKSTVPAAPAS 11 RQNSGSEMTMLRQGVPPRDTGKS VPAA ++ Sbjct: 379 RQNSGSEMTMLRQGVPPRDTGKSPVPAASST 409 >ref|XP_002314471.1| hypothetical protein POPTRDRAFT_565766 [Populus trichocarpa] gi|222863511|gb|EEF00642.1| hypothetical protein POPTRDRAFT_565766 [Populus trichocarpa] Length = 473 Score = 60.8 bits (146), Expect = 1e-07 Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 8/86 (9%) Frame = -1 Query: 235 AVSASASPMTEPVFSS--------SMQYGGALERDGGISTALADGHKISQIGRQNSGSEM 80 AV++SA +E FS+ S+ G LE DGG S A+ +KI Q GRQ+S SE+ Sbjct: 36 AVASSAEKTSEGFFSANRVDDFPTSLSTGKILENDGGSSNMFAESNKIIQGGRQSSNSEL 95 Query: 79 TMLRQGVPPRDTGKSTVPAAPASSAM 2 TM+R PPRD GKS V S M Sbjct: 96 TMIR-STPPRDVGKSPVSQGSVSPGM 120 >ref|XP_002516857.1| conserved hypothetical protein [Ricinus communis] gi|223543945|gb|EEF45471.1| conserved hypothetical protein [Ricinus communis] Length = 3502 Score = 58.5 bits (140), Expect = 5e-07 Identities = 42/120 (35%), Positives = 51/120 (42%), Gaps = 41/120 (34%) Frame = -1 Query: 265 GAYAKVHGGMAVSASASPMTEPVFSSSMQYG----------------------------- 173 G +KVHGGM + +S+ M E FS + +G Sbjct: 314 GPISKVHGGMPIISSSYSMGELGFSGQVPFGSSEFLKHGLAKGSVSSPSEKTMEAHFSPT 373 Query: 172 ------------GALERDGGISTALADGHKISQIGRQNSGSEMTMLRQGVPPRDTGKSTV 29 G +E DGG S AD +KI Q GRQN+ SEMTMLR G PRD GK V Sbjct: 374 NRVDDLPPSLSTGRMENDGGSSNIFADANKIIQGGRQNNNSEMTMLR-GTTPRDMGKFVV 432