BLASTX nr result

ID: Glycyrrhiza24_contig00026166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026166
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|35551...   147   7e-34
ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|35551...   147   7e-34
ref|XP_002314471.1| hypothetical protein POPTRDRAFT_565766 [Popu...    61   1e-07
ref|XP_002516857.1| conserved hypothetical protein [Ricinus comm...    59   5e-07

>ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|355510630|gb|AES91772.1|
           Helicase swr1 [Medicago truncatula]
          Length = 3310

 Score =  147 bits (372), Expect = 7e-34
 Identities = 73/91 (80%), Positives = 78/91 (85%)
 Frame = -1

Query: 283 APGKQQGAYAKVHGGMAVSASASPMTEPVFSSSMQYGGALERDGGISTALADGHKISQIG 104
           APGKQQGAYA+VHGGM V A+ S M EPVFSSSMQYG  L RDGG S  LADGH+ISQIG
Sbjct: 319 APGKQQGAYARVHGGMVVPANVSAMNEPVFSSSMQYGVPLNRDGGSSNTLADGHQISQIG 378

Query: 103 RQNSGSEMTMLRQGVPPRDTGKSTVPAAPAS 11
           RQNSGSEMTMLRQGVPPRDTGKS VPAA ++
Sbjct: 379 RQNSGSEMTMLRQGVPPRDTGKSPVPAASST 409


>ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|355510629|gb|AES91771.1|
           Helicase swr1 [Medicago truncatula]
          Length = 3312

 Score =  147 bits (372), Expect = 7e-34
 Identities = 73/91 (80%), Positives = 78/91 (85%)
 Frame = -1

Query: 283 APGKQQGAYAKVHGGMAVSASASPMTEPVFSSSMQYGGALERDGGISTALADGHKISQIG 104
           APGKQQGAYA+VHGGM V A+ S M EPVFSSSMQYG  L RDGG S  LADGH+ISQIG
Sbjct: 319 APGKQQGAYARVHGGMVVPANVSAMNEPVFSSSMQYGVPLNRDGGSSNTLADGHQISQIG 378

Query: 103 RQNSGSEMTMLRQGVPPRDTGKSTVPAAPAS 11
           RQNSGSEMTMLRQGVPPRDTGKS VPAA ++
Sbjct: 379 RQNSGSEMTMLRQGVPPRDTGKSPVPAASST 409


>ref|XP_002314471.1| hypothetical protein POPTRDRAFT_565766 [Populus trichocarpa]
           gi|222863511|gb|EEF00642.1| hypothetical protein
           POPTRDRAFT_565766 [Populus trichocarpa]
          Length = 473

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
 Frame = -1

Query: 235 AVSASASPMTEPVFSS--------SMQYGGALERDGGISTALADGHKISQIGRQNSGSEM 80
           AV++SA   +E  FS+        S+  G  LE DGG S   A+ +KI Q GRQ+S SE+
Sbjct: 36  AVASSAEKTSEGFFSANRVDDFPTSLSTGKILENDGGSSNMFAESNKIIQGGRQSSNSEL 95

Query: 79  TMLRQGVPPRDTGKSTVPAAPASSAM 2
           TM+R   PPRD GKS V     S  M
Sbjct: 96  TMIR-STPPRDVGKSPVSQGSVSPGM 120


>ref|XP_002516857.1| conserved hypothetical protein [Ricinus communis]
           gi|223543945|gb|EEF45471.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 3502

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 42/120 (35%), Positives = 51/120 (42%), Gaps = 41/120 (34%)
 Frame = -1

Query: 265 GAYAKVHGGMAVSASASPMTEPVFSSSMQYG----------------------------- 173
           G  +KVHGGM + +S+  M E  FS  + +G                             
Sbjct: 314 GPISKVHGGMPIISSSYSMGELGFSGQVPFGSSEFLKHGLAKGSVSSPSEKTMEAHFSPT 373

Query: 172 ------------GALERDGGISTALADGHKISQIGRQNSGSEMTMLRQGVPPRDTGKSTV 29
                       G +E DGG S   AD +KI Q GRQN+ SEMTMLR G  PRD GK  V
Sbjct: 374 NRVDDLPPSLSTGRMENDGGSSNIFADANKIIQGGRQNNNSEMTMLR-GTTPRDMGKFVV 432


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