BLASTX nr result
ID: Glycyrrhiza24_contig00026160
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00026160 (282 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003540924.1| PREDICTED: putative DNA repair and recombina... 116 2e-24 ref|XP_003607480.1| Chromodomain-helicase-DNA-binding protein [M... 99 5e-19 ref|XP_004154596.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA... 78 6e-13 ref|XP_004140040.1| PREDICTED: putative DNA repair and recombina... 78 6e-13 ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA... 77 1e-12 >ref|XP_003540924.1| PREDICTED: putative DNA repair and recombination protein RAD26-like [Glycine max] Length = 870 Score = 116 bits (290), Expect = 2e-24 Identities = 56/65 (86%), Positives = 60/65 (92%) Frame = -2 Query: 281 KIPDCVPKKQKVPSIDERKRTQFSLLAQSMGMGELAFSKWLLSATPLEREKVLADYKKKK 102 K PD +PKKQKVP IDERKRTQ+ LLAQS+GMGELAFSKWLLSATPLEREKVL D+KKKK Sbjct: 806 KKPDSIPKKQKVPLIDERKRTQYRLLAQSLGMGELAFSKWLLSATPLEREKVLLDFKKKK 865 Query: 101 KIPNG 87 KIPNG Sbjct: 866 KIPNG 870 >ref|XP_003607480.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula] gi|355508535|gb|AES89677.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula] Length = 1283 Score = 98.6 bits (244), Expect = 5e-19 Identities = 48/60 (80%), Positives = 53/60 (88%) Frame = -2 Query: 281 KIPDCVPKKQKVPSIDERKRTQFSLLAQSMGMGELAFSKWLLSATPLEREKVLADYKKKK 102 K DCVPKKQK+ IDERKR QFSLLA+SMGM +LAFSKWLLSATP+EREKVL DYK+KK Sbjct: 1221 KKSDCVPKKQKILLIDERKRAQFSLLAESMGMEDLAFSKWLLSATPVEREKVLIDYKRKK 1280 >ref|XP_004154596.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and recombination protein RAD26-like [Cucumis sativus] Length = 840 Score = 78.2 bits (191), Expect = 6e-13 Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 12/74 (16%) Frame = -2 Query: 272 DCVPKKQKVPSID-----------ERKRTQFSLLAQSMGMGELAFSKWLLSATPLEREKV 126 DC PK+ VP I +RK+ Q+ +LA+ +GMGEL FSKWLLSATP++R+KV Sbjct: 767 DCTPKQPHVPEIKKRKLDDLSSSMDRKKIQYRILAEFVGMGELEFSKWLLSATPMQRQKV 826 Query: 125 LADYKKKK-KIPNG 87 L DY+++K KIPNG Sbjct: 827 LKDYRRRKEKIPNG 840 >ref|XP_004140040.1| PREDICTED: putative DNA repair and recombination protein RAD26-like [Cucumis sativus] Length = 880 Score = 78.2 bits (191), Expect = 6e-13 Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 12/74 (16%) Frame = -2 Query: 272 DCVPKKQKVPSID-----------ERKRTQFSLLAQSMGMGELAFSKWLLSATPLEREKV 126 DC PK+ VP I +RK+ Q+ +LA+ +GMGEL FSKWLLSATP++R+KV Sbjct: 807 DCTPKQPHVPEIKKRKLDDLSSSMDRKKIQYRILAEFVGMGELEFSKWLLSATPMQRQKV 866 Query: 125 LADYKKKK-KIPNG 87 L DY+++K KIPNG Sbjct: 867 LKDYRRRKEKIPNG 880 >ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and recombination protein RAD26-like [Vitis vinifera] Length = 851 Score = 77.4 bits (189), Expect = 1e-12 Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 1/64 (1%) Frame = -2 Query: 275 PDCVPKKQKVPSIDERKRTQFSLLAQSMGMGELAFSKWLLSATPLEREKVLADYKK-KKK 99 P+ V +K+ S + K+ +FSLLAQ MGM E+ FSKWLL+A P EREKVL DYKK KKK Sbjct: 788 PNGVSRKENASSAKDWKKREFSLLAQFMGMKEVEFSKWLLAAAPSEREKVLQDYKKRKKK 847 Query: 98 IPNG 87 IPNG Sbjct: 848 IPNG 851