BLASTX nr result

ID: Glycyrrhiza24_contig00026160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026160
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540924.1| PREDICTED: putative DNA repair and recombina...   116   2e-24
ref|XP_003607480.1| Chromodomain-helicase-DNA-binding protein [M...    99   5e-19
ref|XP_004154596.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA...    78   6e-13
ref|XP_004140040.1| PREDICTED: putative DNA repair and recombina...    78   6e-13
ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA...    77   1e-12

>ref|XP_003540924.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
            [Glycine max]
          Length = 870

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/65 (86%), Positives = 60/65 (92%)
 Frame = -2

Query: 281  KIPDCVPKKQKVPSIDERKRTQFSLLAQSMGMGELAFSKWLLSATPLEREKVLADYKKKK 102
            K PD +PKKQKVP IDERKRTQ+ LLAQS+GMGELAFSKWLLSATPLEREKVL D+KKKK
Sbjct: 806  KKPDSIPKKQKVPLIDERKRTQYRLLAQSLGMGELAFSKWLLSATPLEREKVLLDFKKKK 865

Query: 101  KIPNG 87
            KIPNG
Sbjct: 866  KIPNG 870


>ref|XP_003607480.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
            gi|355508535|gb|AES89677.1|
            Chromodomain-helicase-DNA-binding protein [Medicago
            truncatula]
          Length = 1283

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/60 (80%), Positives = 53/60 (88%)
 Frame = -2

Query: 281  KIPDCVPKKQKVPSIDERKRTQFSLLAQSMGMGELAFSKWLLSATPLEREKVLADYKKKK 102
            K  DCVPKKQK+  IDERKR QFSLLA+SMGM +LAFSKWLLSATP+EREKVL DYK+KK
Sbjct: 1221 KKSDCVPKKQKILLIDERKRAQFSLLAESMGMEDLAFSKWLLSATPVEREKVLIDYKRKK 1280


>ref|XP_004154596.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
           recombination protein RAD26-like [Cucumis sativus]
          Length = 840

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 12/74 (16%)
 Frame = -2

Query: 272 DCVPKKQKVPSID-----------ERKRTQFSLLAQSMGMGELAFSKWLLSATPLEREKV 126
           DC PK+  VP I            +RK+ Q+ +LA+ +GMGEL FSKWLLSATP++R+KV
Sbjct: 767 DCTPKQPHVPEIKKRKLDDLSSSMDRKKIQYRILAEFVGMGELEFSKWLLSATPMQRQKV 826

Query: 125 LADYKKKK-KIPNG 87
           L DY+++K KIPNG
Sbjct: 827 LKDYRRRKEKIPNG 840


>ref|XP_004140040.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
            [Cucumis sativus]
          Length = 880

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/74 (52%), Positives = 52/74 (70%), Gaps = 12/74 (16%)
 Frame = -2

Query: 272  DCVPKKQKVPSID-----------ERKRTQFSLLAQSMGMGELAFSKWLLSATPLEREKV 126
            DC PK+  VP I            +RK+ Q+ +LA+ +GMGEL FSKWLLSATP++R+KV
Sbjct: 807  DCTPKQPHVPEIKKRKLDDLSSSMDRKKIQYRILAEFVGMGELEFSKWLLSATPMQRQKV 866

Query: 125  LADYKKKK-KIPNG 87
            L DY+++K KIPNG
Sbjct: 867  LKDYRRRKEKIPNG 880


>ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
           recombination protein RAD26-like [Vitis vinifera]
          Length = 851

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/64 (62%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
 Frame = -2

Query: 275 PDCVPKKQKVPSIDERKRTQFSLLAQSMGMGELAFSKWLLSATPLEREKVLADYKK-KKK 99
           P+ V +K+   S  + K+ +FSLLAQ MGM E+ FSKWLL+A P EREKVL DYKK KKK
Sbjct: 788 PNGVSRKENASSAKDWKKREFSLLAQFMGMKEVEFSKWLLAAAPSEREKVLQDYKKRKKK 847

Query: 98  IPNG 87
           IPNG
Sbjct: 848 IPNG 851


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