BLASTX nr result

ID: Glycyrrhiza24_contig00026149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026149
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623648.1| Pentatricopeptide repeat-containing protein ...   219   1e-55
ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containi...   217   9e-55
ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containi...   187   8e-46
emb|CBI39641.3| unnamed protein product [Vitis vinifera]              187   8e-46
ref|XP_002330058.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45

>ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498663|gb|AES79866.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  219 bits (559), Expect = 1e-55
 Identities = 103/111 (92%), Positives = 107/111 (96%)
 Frame = -1

Query: 336 WNSMITGYSQHGLGEEALNVFHDMCSSGVSPDEVTFIGVLSACSYSGKVKEGLEIFESMK 157
           WNSMITGYSQHGLGEEALNVFHDMCSSGV PDEVTFIGVLSACSYSGKVKEG EIFE+MK
Sbjct: 404 WNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMK 463

Query: 156 CNYQVEPGIAHYACMVDLLGRAGQVNDAMELVEKMPMEPDAIVWGALLGAC 4
           C YQVEPGI HYACMVDLLGRAG+V++AMELVEKMPMEPDAIVWGALLGAC
Sbjct: 464 CTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGAC 514


>ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  217 bits (552), Expect = 9e-55
 Identities = 101/111 (90%), Positives = 107/111 (96%)
 Frame = -1

Query: 336 WNSMITGYSQHGLGEEALNVFHDMCSSGVSPDEVTFIGVLSACSYSGKVKEGLEIFESMK 157
           WNSMITGYSQHGLGEEALNVFHDMCSSGV PD+VTFIGVLSACSYSGKVKEGLE+FE+MK
Sbjct: 407 WNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMK 466

Query: 156 CNYQVEPGIAHYACMVDLLGRAGQVNDAMELVEKMPMEPDAIVWGALLGAC 4
           C YQVEPGI HYAC+VDLLGRA QVN+AM+LVEKMPMEPDAIVWGALLGAC
Sbjct: 467 CKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGAC 517


>ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  187 bits (475), Expect = 8e-46
 Identities = 87/111 (78%), Positives = 99/111 (89%)
 Frame = -1

Query: 336 WNSMITGYSQHGLGEEALNVFHDMCSSGVSPDEVTFIGVLSACSYSGKVKEGLEIFESMK 157
           WNS+ITGY+QHGL EEAL VFH+MCSSG++ D VTF+GVLSACSY+GKVKEGLEIFESMK
Sbjct: 399 WNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMK 458

Query: 156 CNYQVEPGIAHYACMVDLLGRAGQVNDAMELVEKMPMEPDAIVWGALLGAC 4
             Y VEP   HYACMVDLLGRAG VNDAM+L++KMP+E DAI+WGALLGAC
Sbjct: 459 SKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGAC 509


>emb|CBI39641.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  187 bits (475), Expect = 8e-46
 Identities = 87/111 (78%), Positives = 99/111 (89%)
 Frame = -1

Query: 336 WNSMITGYSQHGLGEEALNVFHDMCSSGVSPDEVTFIGVLSACSYSGKVKEGLEIFESMK 157
           WNS+ITGY+QHGL EEAL VFH+MCSSG++ D VTF+GVLSACSY+GKVKEGLEIFESMK
Sbjct: 2   WNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMK 61

Query: 156 CNYQVEPGIAHYACMVDLLGRAGQVNDAMELVEKMPMEPDAIVWGALLGAC 4
             Y VEP   HYACMVDLLGRAG VNDAM+L++KMP+E DAI+WGALLGAC
Sbjct: 62  SKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGAC 112


>ref|XP_002330058.1| predicted protein [Populus trichocarpa] gi|222871483|gb|EEF08614.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score =  186 bits (472), Expect = 2e-45
 Identities = 85/111 (76%), Positives = 98/111 (88%)
 Frame = -1

Query: 336 WNSMITGYSQHGLGEEALNVFHDMCSSGVSPDEVTFIGVLSACSYSGKVKEGLEIFESMK 157
           WNS+I GY+QHG GE+AL VFHDM SS ++PDE+TFIGVLSACSY+GKVKEGLEIFESMK
Sbjct: 266 WNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMK 325

Query: 156 CNYQVEPGIAHYACMVDLLGRAGQVNDAMELVEKMPMEPDAIVWGALLGAC 4
             YQV+P   HYACMVDLLGRAG++N+AM L+E MP+E DAIVWGALLGAC
Sbjct: 326 SKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGAC 376


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