BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026138
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containi...   196   1e-48
ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
ref|XP_003630734.1| Pentatricopeptide repeat-containing protein ...   183   1e-44
ref|XP_002530894.1| pentatricopeptide repeat-containing protein,...   155   3e-36
ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34

>ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Glycine max]
          Length = 523

 Score =  196 bits (499), Expect = 1e-48
 Identities = 97/115 (84%), Positives = 101/115 (87%)
 Frame = +1

Query: 1   SCKQFAILWDFLIEMRESRSCEIKSEIFWLIFKAYSWANLPDGVIRSFTRMDEFGIKPTI 180
           SCKQFAILWDFLIEMR S   EI SEIFWLIF+AYS ANLPDG IRSF RMDEFGIKPTI
Sbjct: 123 SCKQFAILWDFLIEMRGSCHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGIKPTI 182

Query: 181 HDFDMLLYFLCKRKHVKQAQQFFDQAKSRFLLTAKTYSILISGWGKIGDSGKASE 345
           +DFD LL+ LCK KHVKQAQQFFDQAK+RFLLTAKTYSILISGWG IGDS KA E
Sbjct: 183 NDFDKLLFILCKTKHVKQAQQFFDQAKNRFLLTAKTYSILISGWGDIGDSEKAHE 237


>ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Glycine max]
          Length = 523

 Score =  193 bits (490), Expect = 1e-47
 Identities = 93/115 (80%), Positives = 99/115 (86%)
 Frame = +1

Query: 1   SCKQFAILWDFLIEMRESRSCEIKSEIFWLIFKAYSWANLPDGVIRSFTRMDEFGIKPTI 180
           SCKQFAILWDFL EMRES   EI SEIFWLIF+AYS ANLPDG IRSF RMDEFG+KPTI
Sbjct: 123 SCKQFAILWDFLTEMRESHHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTI 182

Query: 181 HDFDMLLYFLCKRKHVKQAQQFFDQAKSRFLLTAKTYSILISGWGKIGDSGKASE 345
           HD D LL+ LCKRKHVKQAQQ F QAK+RF LTAKTYSILISGWG+IGDS KA +
Sbjct: 183 HDLDKLLFILCKRKHVKQAQQLFHQAKNRFSLTAKTYSILISGWGEIGDSEKACD 237


>ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524756|gb|AET05210.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 520

 Score =  183 bits (465), Expect = 1e-44
 Identities = 90/114 (78%), Positives = 99/114 (86%), Gaps = 1/114 (0%)
 Frame = +1

Query: 7   KQFAILWDFLIEMRES-RSCEIKSEIFWLIFKAYSWANLPDGVIRSFTRMDEFGIKPTIH 183
           KQFAILWDFLIE RES  SC+I +EIFW+IF AYS A+LPDG IRSF RMDEFGIKP+I 
Sbjct: 121 KQFAILWDFLIETRESDSSCKITNEIFWIIFTAYSRADLPDGAIRSFVRMDEFGIKPSII 180

Query: 184 DFDMLLYFLCKRKHVKQAQQFFDQAKSRFLLTAKTYSILISGWGKIGDSGKASE 345
           D D+LLY LCK+KHV+QAQQFFDQ KS FLLT KTYSILI+GWGKIGDSGKA E
Sbjct: 181 DVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLTTKTYSILINGWGKIGDSGKARE 234


>ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529547|gb|EEF31500.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  155 bits (392), Expect = 3e-36
 Identities = 73/113 (64%), Positives = 86/113 (76%)
 Frame = +1

Query: 1   SCKQFAILWDFLIEMRESRSCEIKSEIFWLIFKAYSWANLPDGVIRSFTRMDEFGIKPTI 180
           S KQFA+LWDFLIE+RES+  EI  ++FWL+F+AYS ANLP   IR+F RM EFG+KPTI
Sbjct: 120 SSKQFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRANLPSDAIRAFDRMVEFGLKPTI 179

Query: 181 HDFDMLLYFLCKRKHVKQAQQFFDQAKSRFLLTAKTYSILISGWGKIGDSGKA 339
            D D LLY LCKRKH K AQQ FD+ K +F   AKTYSIL+ GWG IG+S  A
Sbjct: 180 DDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSILVRGWGDIGESVSA 232


>ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|222848249|gb|EEE85796.1|
           predicted protein [Populus trichocarpa]
          Length = 523

 Score =  149 bits (376), Expect = 2e-34
 Identities = 70/111 (63%), Positives = 85/111 (76%)
 Frame = +1

Query: 7   KQFAILWDFLIEMRESRSCEIKSEIFWLIFKAYSWANLPDGVIRSFTRMDEFGIKPTIHD 186
           +QFAILWDFLIEMRES   EI  EI WL+F++YS ANLP   IR+F RM EFG++P++ D
Sbjct: 126 RQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSDAIRAFDRMAEFGLRPSVDD 185

Query: 187 FDMLLYFLCKRKHVKQAQQFFDQAKSRFLLTAKTYSILISGWGKIGDSGKA 339
            D LLY LCK KHVK AQQFFD+ K +F   AKTYSIL+ GWG IG++ +A
Sbjct: 186 LDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWGDIGEAVEA 236