BLASTX nr result

ID: Glycyrrhiza24_contig00026136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026136
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...   147   9e-34
ref|XP_002525484.1| conserved hypothetical protein [Ricinus comm...   139   2e-31
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
gb|ABK92768.1| unknown [Populus trichocarpa]                          139   3e-31
ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cuc...   135   3e-30

>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
           gi|296088512|emb|CBI37503.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score =  147 bits (371), Expect = 9e-34
 Identities = 69/140 (49%), Positives = 90/140 (64%)
 Frame = +3

Query: 6   NSDTIFEVLSRIPVKPLLGLKCISREWHRIISSHSFIKAQLQNKGLALTGFIVQDKFMWC 185
           + D   +VLSR+P K LLGLKC+ + W RIIS  SFI+  LQ     L GF  Q+++ WC
Sbjct: 3   SDDICMDVLSRLPTKTLLGLKCVCKRWRRIISDRSFIQDLLQRPE-PLAGFFFQERYQWC 61

Query: 186 KEDIKTVGYIPLETXXXXXATVHHTVFGFLPEEVVVLSSCKGIVCCRSCLPSPQPTIYLC 365
            EDI T+ YIP          V  T+F FLPE+VV+L SC G+VCCRS  PSP P+I++C
Sbjct: 62  DEDISTISYIPATMEG---TQVQQTIFSFLPEDVVILGSCNGLVCCRSVFPSPDPSIFVC 118

Query: 366 NPSNREWITLEWPSYDRRES 425
           NPSN++WI L   + D+  S
Sbjct: 119 NPSNKQWIRLLETTPDKESS 138


>ref|XP_002525484.1| conserved hypothetical protein [Ricinus communis]
           gi|223535221|gb|EEF36899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 375

 Score =  139 bits (351), Expect = 2e-31
 Identities = 64/143 (44%), Positives = 94/143 (65%)
 Frame = +3

Query: 3   LNSDTIFEVLSRIPVKPLLGLKCISREWHRIISSHSFIKAQLQNKGLALTGFIVQDKFMW 182
           LN+D  F+VLSR P K L+ LK +S+ W  +I + SFI+ Q + +   L+GF  Q +F W
Sbjct: 8   LNTDISFDVLSRFPAKDLVELKRVSKGWQHLIMNQSFIQIQSRRRE-PLSGFFFQQRFQW 66

Query: 183 CKEDIKTVGYIPLETXXXXXATVHHTVFGFLPEEVVVLSSCKGIVCCRSCLPSPQPTIYL 362
            + DI+T+ YIP++        +H  VF FLP++VV+L++C G+VCCRSC P   P I++
Sbjct: 67  SEYDIETINYIPVK---WEGLELHKKVFDFLPQDVVLLTTCNGLVCCRSCFPFELPAIFV 123

Query: 363 CNPSNREWITLEWPSYDRRESIA 431
           CNP N+EW+ L+W   D+  SIA
Sbjct: 124 CNPLNKEWVKLDWTEPDKEHSIA 146


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/143 (47%), Positives = 90/143 (62%)
 Frame = +3

Query: 3   LNSDTIFEVLSRIPVKPLLGLKCISREWHRIISSHSFIKAQLQNKGLALTGFIVQDKFMW 182
           L++D  F+VLSR+  K LLGLKC+S+ W  +IS  SFI+AQ Q K   L+GF  Q +  +
Sbjct: 7   LDTDIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKKE-PLSGFFFQQRHRY 65

Query: 183 CKEDIKTVGYIPLETXXXXXATVHHTVFGFLPEEVVVLSSCKGIVCCRSCLPSPQPTIYL 362
           C +DIKT+ Y P+E        +   VF FLP++VVVL+ C G+VCCRSC P   P IY+
Sbjct: 66  CPDDIKTITYFPVERNR-----LQQDVFAFLPQDVVVLALCNGLVCCRSCYPFEDPAIYV 120

Query: 363 CNPSNREWITLEWPSYDRRESIA 431
           CNP N EW  L+W    +   IA
Sbjct: 121 CNPLNSEWWKLDWKEPGKESFIA 143


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/143 (47%), Positives = 90/143 (62%)
 Frame = +3

Query: 3   LNSDTIFEVLSRIPVKPLLGLKCISREWHRIISSHSFIKAQLQNKGLALTGFIVQDKFMW 182
           L++D  F+VLSR+  K LLGLKC+S+ W  +IS  SFI+AQ Q K   L+GF  Q +  +
Sbjct: 7   LDTDIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKKE-PLSGFFFQQRHRY 65

Query: 183 CKEDIKTVGYIPLETXXXXXATVHHTVFGFLPEEVVVLSSCKGIVCCRSCLPSPQPTIYL 362
           C +DIKT+ Y P+E        +   VF FLP++VVVL+ C G+VCCRSC P   P IY+
Sbjct: 66  CPDDIKTITYFPVERNR-----LQQDVFAFLPQDVVVLALCNGLVCCRSCYPFEDPAIYV 120

Query: 363 CNPSNREWITLEWPSYDRRESIA 431
           CNP N EW  L+W    +   IA
Sbjct: 121 CNPLNSEWWKLDWKEPGKESFIA 143


>ref|XP_004171566.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 399

 Score =  135 bits (341), Expect = 3e-30
 Identities = 66/145 (45%), Positives = 93/145 (64%), Gaps = 5/145 (3%)
 Frame = +3

Query: 12  DTIFEVLSRIPVKPLLGLKCISREWHRIISSHSFIKAQLQNKGLALTGFIVQDKFMWCKE 191
           D +F+VLSR+P K LL ++ +S+ WHR+I   SF++AQ Q  GLAL+GF+ Q+K+  C  
Sbjct: 6   DILFDVLSRLPTKTLLEMRFVSKAWHRLILDRSFVQAQFQKCGLALSGFMFQEKYRKCPI 65

Query: 192 DIKTVGYIPLETXXXXXATVHHTVFGFLPEEVVVLSSCKGIVCCRSCL-----PSPQPTI 356
           DI T  Y+P++      + V   VFGFLPE+VV+L SC G+VCCRSC       +   TI
Sbjct: 66  DISTFTYMPIDA----DSKVQKMVFGFLPEDVVILQSCNGLVCCRSCFRTQHSTTHSTTI 121

Query: 357 YLCNPSNREWITLEWPSYDRRESIA 431
           Y+CNP  ++W++ E    D   SIA
Sbjct: 122 YVCNPLFKKWVSFEVAQLDSFSSIA 146


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