BLASTX nr result

ID: Glycyrrhiza24_contig00026132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026132
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               218   4e-55
ref|XP_002513947.1| conserved hypothetical protein [Ricinus comm...   201   7e-50
emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]   161   8e-38
emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera]   150   2e-34
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          125   6e-27

>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  218 bits (556), Expect = 4e-55
 Identities = 102/162 (62%), Positives = 129/162 (79%), Gaps = 1/162 (0%)
 Frame = +2

Query: 29  YAKVCPDISKIEVFAGKNFRRWQERIFTVLDMHGVATALTNQKPPETDP-RQLEQWTYAN 205
           +AK+ PD+SKIEVF G+NFRRWQER+ T+LDM+GVA ALT  KP  T   +Q++ W +AN
Sbjct: 26  FAKLFPDVSKIEVFTGQNFRRWQERVSTLLDMYGVAHALTTAKPDSTTAAKQVDDWIHAN 85

Query: 206 KVCRHTIISTLSDELFDVYCSYKVAKEIWDNLNDKYTAEDASKQKFVIGNYLRWQMVDEK 385
           KVCRHT++S LS++LFDVY SYK AK+IWD+L  KYTAED  +Q+FVI  Y RW+M+  K
Sbjct: 86  KVCRHTLLSVLSNDLFDVYASYKNAKDIWDSLILKYTAEDIVRQRFVIAKYYRWEMIKGK 145

Query: 386 DIKEQINEYHKLLEELKAENINLQDEFVAGALVEKLPNSWND 511
           DIK QINEYHKL+E++K E+I L DEFV+  L+EKLP SW D
Sbjct: 146 DIKIQINEYHKLIEDIKTESIKLPDEFVSELLIEKLPQSWTD 187


>ref|XP_002513947.1| conserved hypothetical protein [Ricinus communis]
           gi|223547033|gb|EEF48530.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 169

 Score =  201 bits (511), Expect = 7e-50
 Identities = 94/146 (64%), Positives = 119/146 (81%)
 Frame = +2

Query: 17  PPVTYAKVCPDISKIEVFAGKNFRRWQERIFTVLDMHGVATALTNQKPPETDPRQLEQWT 196
           P V++AK  PDISKI VF G+NF+RWQER+F++LDMHGVA ALT+ KP ET  ++ + W 
Sbjct: 29  PAVSFAKPFPDISKILVFDGENFKRWQERVFSILDMHGVAYALTDPKPAETTKKEFDLWV 88

Query: 197 YANKVCRHTIISTLSDELFDVYCSYKVAKEIWDNLNDKYTAEDASKQKFVIGNYLRWQMV 376
           YANKVCRHTIISTL      VYC+YK A++IWD++ +KYTA+DA KQKFVIG + +W+M+
Sbjct: 89  YANKVCRHTIISTLY-----VYCAYKEAQQIWDSMVNKYTAKDAGKQKFVIGKFYKWEMM 143

Query: 377 DEKDIKEQINEYHKLLEELKAENINL 454
           ++KDIK QINEYHKLLE+LK ENI L
Sbjct: 144 EDKDIKLQINEYHKLLEDLKGENITL 169


>emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]
          Length = 1096

 Score =  161 bits (407), Expect = 8e-38
 Identities = 76/156 (48%), Positives = 102/156 (65%)
 Frame = +2

Query: 44  PDISKIEVFAGKNFRRWQERIFTVLDMHGVATALTNQKPPETDPRQLEQWTYANKVCRHT 223
           PD SKI+ F G  F+RW ER+F+ +D+  +   L + KP +     L  W   NK  RH 
Sbjct: 10  PDTSKIDPFNGTFFKRWHERVFSAIDVVNLGHILIDPKPKDGS-HLLPTWETGNKQVRHA 68

Query: 224 IISTLSDELFDVYCSYKVAKEIWDNLNDKYTAEDASKQKFVIGNYLRWQMVDEKDIKEQI 403
           I STLS+ELFD+YC +KVAKEIWD +N KY  EDA   K+VIGN+  +QM ++KD+  QI
Sbjct: 69  IPSTLSNELFDIYCQFKVAKEIWDAMNKKYILEDAGTHKYVIGNFRNFQMTEDKDVSSQI 128

Query: 404 NEYHKLLEELKAENINLQDEFVAGALVEKLPNSWND 511
           ++YH L+ +L  E+I L + F+ G LVE LP SW D
Sbjct: 129 HDYHLLINDLAIEDIKLPEPFMVGYLVETLPESWKD 164


>emb|CAN78262.1| hypothetical protein VITISV_006704 [Vitis vinifera]
          Length = 565

 Score =  150 bits (378), Expect = 2e-34
 Identities = 69/142 (48%), Positives = 97/142 (68%)
 Frame = +2

Query: 44  PDISKIEVFAGKNFRRWQERIFTVLDMHGVATALTNQKPPETDPRQLEQWTYANKVCRHT 223
           PD SKI+ F G  F+RWQER+F+ +D+  +   LT+ KP +     L  W   NK  RH 
Sbjct: 10  PDTSKIDPFNGTFFKRWQERVFSAIDVVNLEHILTDPKPKDGS-HLLPTWETGNKQVRHA 68

Query: 224 IISTLSDELFDVYCSYKVAKEIWDNLNDKYTAEDASKQKFVIGNYLRWQMVDEKDIKEQI 403
           I+STLS+ELFD+YC +KVAKEIWD +N KY  EDA  QK+ IGN+  +QM++++D+  QI
Sbjct: 69  ILSTLSNELFDIYCQFKVAKEIWDAMNKKYILEDAETQKYAIGNFRNFQMIEDRDVSSQI 128

Query: 404 NEYHKLLEELKAENINLQDEFV 469
           ++YH L+ +L  E+I L + FV
Sbjct: 129 HDYHLLINDLAIEDIKLPEPFV 150


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  125 bits (313), Expect = 6e-27
 Identities = 60/157 (38%), Positives = 99/157 (63%), Gaps = 7/157 (4%)
 Frame = +2

Query: 62  EVFAGKNFRRWQERIFTVLDMHGVATALTNQKPP----ETDPR---QLEQWTYANKVCRH 220
           E F G+NF+RWQ+++F  L    +A  LT   P     ETD +    ++ W +++ +C++
Sbjct: 43  EKFNGQNFKRWQQKMFFYLTTLNLARFLTKDAPKPKEGETDIQVASAIDAWHHSDFLCKN 102

Query: 221 TIISTLSDELFDVYCSYKVAKEIWDNLNDKYTAEDASKQKFVIGNYLRWQMVDEKDIKEQ 400
            +++ LSD L++VY   K AKE+W++L+ KY  EDA  +KFV+G +L ++MVD K +  Q
Sbjct: 103 YVMNGLSDSLYNVYIGKKTAKELWESLDRKYKTEDAGTKKFVVGRFLDFKMVDSKTVISQ 162

Query: 401 INEYHKLLEELKAENINLQDEFVAGALVEKLPNSWND 511
           + E   +L E+ AE ++L + F   A++EKLP +W D
Sbjct: 163 VQELQIILSEILAEGMHLSETFQVAAIIEKLPPAWKD 199


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