BLASTX nr result

ID: Glycyrrhiza24_contig00026131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026131
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602221.1| RING finger protein [Medicago truncatula] gi...    68   9e-10
ref|XP_003524438.1| PREDICTED: putative RING-H2 finger protein A...    61   8e-08
ref|XP_002318390.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_003526705.1| PREDICTED: putative RING-H2 finger protein A...    61   1e-07
gb|ACU24071.1| unknown [Glycine max]                                   58   7e-07

>ref|XP_003602221.1| RING finger protein [Medicago truncatula]
           gi|355491269|gb|AES72472.1| RING finger protein
           [Medicago truncatula]
          Length = 388

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
 Frame = -2

Query: 283 RPISCLNFSSGDGDYSVVVTMSDPPFPTPWNSSCRLISSASIPVQD--MPSLFWTDYYSD 110
           +PI+CL+  S    Y+V  T S   F    +S C L+ + ++PVQ      +  ++   D
Sbjct: 146 KPIACLSDYS---KYNVFATPSLTVF-VHLSSVCDLVDTVNVPVQSPFFDQVLSSELNDD 201

Query: 109 IPLQWDNPDCATCESRGGRCGFLGDPAFHVACYDLP 2
           + L W++P C  CES GGRCGF  +  F +ACY++P
Sbjct: 202 LRLSWNSPPCGRCESHGGRCGFKNNSTFEIACYNVP 237


>ref|XP_003524438.1| PREDICTED: putative RING-H2 finger protein ATL21B-like [Glycine
           max]
          Length = 582

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
 Frame = -2

Query: 310 SNLTN---FALVRPISCLNFSSGDGDYSVVVTMSDPPFPTP-WNSSCRLISSASIP--VQ 149
           SN+T+   + LV PISCL   S + +YSV+ + S P   +P  +  C+++S A +P  V 
Sbjct: 142 SNVTDSSQYPLV-PISCL---SNNSNYSVIASWSQPIMSSPSLSQQCQVMSRALVPLPVL 197

Query: 148 DMPSL-FWTDYYSDIPLQWDNPDCATCESRGGRCGF 44
           DMP   FW D  +D+ L W  PDC  C   G  CGF
Sbjct: 198 DMPMWPFWPDLNTDLDLVWTEPDCRNCALSGQVCGF 233


>ref|XP_002318390.1| predicted protein [Populus trichocarpa] gi|222859063|gb|EEE96610.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 7/102 (6%)
 Frame = -2

Query: 286 VRPISCLNFSSGDGDYSVVVTMS--DPPFPTPWNSSCRLISSASIPV-----QDMPSLFW 128
           + PI+CL+ S+    Y+V  T S     F    NSSC LI    +PV     Q++ S   
Sbjct: 139 LNPIACLSGST----YTVFATSSLRIVDFLQTRNSSCNLIRMVPVPVMRPFYQEISS--- 191

Query: 127 TDYYSDIPLQWDNPDCATCESRGGRCGFLGDPAFHVACYDLP 2
           +D   D+ L WD PDC  CESRGGRCGF  + +    C ++P
Sbjct: 192 SDLSEDLLLTWDQPDCGKCESRGGRCGFRTNSS-ETVCSNVP 232


>ref|XP_003526705.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Glycine
           max]
          Length = 385

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
 Frame = -2

Query: 283 RPISCLNFSSGDGDYSVVVTMSDPPFPTPWNSSCRLISSASIPVQDM--PSLFWTDYYSD 110
           RPISCL+ S     Y V  T S   F    +S C L+++ ++PVQ      +  ++   D
Sbjct: 143 RPISCLSDSP---KYLVFATPSSTVFGH-LSSVCDLVATVTVPVQSPFNDRVTSSELSDD 198

Query: 109 IPLQWDNPDCATCESRGGRCGFLGDPAFHVACYDLP 2
           +   WD+P C  CES GGRCGF  +  F + C  +P
Sbjct: 199 LRFSWDSPSCGRCESHGGRCGFKSNETFELDCSLVP 234


>gb|ACU24071.1| unknown [Glycine max]
          Length = 385

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
 Frame = -2

Query: 283 RPISCLNFSSGDGDYSVVVTMSDPPFPTPWNSSCRLISSASIPVQDM--PSLFWTDYYSD 110
           RPISCL+ S  +    V  T S   F    +S C L+++ ++PVQ      +  ++   D
Sbjct: 143 RPISCLSDSPKN---LVFATPSSTVFGH-LSSVCDLVATVTVPVQSPFNDRVTSSELSDD 198

Query: 109 IPLQWDNPDCATCESRGGRCGFLGDPAFHVACYDLP 2
           +   WD+P C  CES GGRCGF  +  F + C  +P
Sbjct: 199 LRFSWDSPSCGRCESHGGRCGFKSNETFELDCSLVP 234


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