BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026128
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623405.1| Pentatricopeptide repeat-containing protein ...   120   1e-25
ref|XP_003551582.1| PREDICTED: pentatricopeptide repeat-containi...   107   8e-22
ref|NP_188429.1| pentatricopeptide repeat-containing protein [Ar...    92   4e-17
ref|XP_002883101.1| pentatricopeptide repeat-containing protein ...    92   6e-17
ref|XP_002322098.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16

>ref|XP_003623405.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498420|gb|AES79623.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 737

 Score =  120 bits (300), Expect = 1e-25
 Identities = 64/114 (56%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
 Frame = -3

Query: 340 QALTFLI-PHKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIATILHSLCDSNRFSEAH 164
           ++LTFLI PHKP+                              +TILH+LC+SNRF EAH
Sbjct: 11  KSLTFLILPHKPRPFILQFSSLSFQPSQHTI------------STILHTLCNSNRFEEAH 58

Query: 163 QRFSLFLASGYVPDHRTCNLFLARLLRSRTPLQTWDLVQSLIRAKPGFVPSLVN 2
           QRFSLFL+SG +PDHRTCNL LA+LLRS+TP QTW LV+SLI+ K GFVPSLVN
Sbjct: 59  QRFSLFLSSGSIPDHRTCNLLLAKLLRSKTPFQTWSLVKSLIQIKAGFVPSLVN 112


>ref|XP_003551582.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g18020-like [Glycine max]
          Length = 650

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/71 (73%), Positives = 60/71 (84%)
 Frame = -3

Query: 214 ATILHSLCDSNRFSEAHQRFSLFLASGYVPDHRTCNLFLARLLRSRTPLQTWDLVQSLIR 35
           ATI+HSLC+S+RFSEAH RFSL LAS  +PD RTCN+ LARLL SRTP  TW L++SLI 
Sbjct: 51  ATIIHSLCNSHRFSEAHHRFSLSLASASLPDERTCNVLLARLLASRTPRATWRLLRSLIA 110

Query: 34  AKPGFVPSLVN 2
           +KPGFVPSLVN
Sbjct: 111 SKPGFVPSLVN 121


>ref|NP_188429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274006|sp|Q9LSK8.1|PP240_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g18020 gi|11994208|dbj|BAB01330.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332642514|gb|AEE76035.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 688

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 41/71 (57%), Positives = 55/71 (77%)
 Frame = -3

Query: 214 ATILHSLCDSNRFSEAHQRFSLFLASGYVPDHRTCNLFLARLLRSRTPLQTWDLVQSLIR 35
           ++++HSLCD+ RF EAH+RF LFLASG++PD RTCN+ +ARLL SR+P+ T  ++  LI 
Sbjct: 94  SSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIG 153

Query: 34  AKPGFVPSLVN 2
            K  FVPSL N
Sbjct: 154 FKKEFVPSLTN 164


>ref|XP_002883101.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297328941|gb|EFH59360.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 689

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/71 (56%), Positives = 56/71 (78%)
 Frame = -3

Query: 214 ATILHSLCDSNRFSEAHQRFSLFLASGYVPDHRTCNLFLARLLRSRTPLQTWDLVQSLIR 35
           ++++HSLCD+ RF EAH+RF LF+ASG++PD RTCN+ +ARLL  R+P+ T+ ++Q LI 
Sbjct: 94  SSVIHSLCDAGRFDEAHRRFLLFVASGFIPDERTCNVIIARLLDLRSPVSTFGVIQRLIG 153

Query: 34  AKPGFVPSLVN 2
            K  FVPSL N
Sbjct: 154 FKKEFVPSLTN 164


>ref|XP_002322098.1| predicted protein [Populus trichocarpa] gi|222869094|gb|EEF06225.1|
           predicted protein [Populus trichocarpa]
          Length = 668

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/71 (56%), Positives = 54/71 (76%)
 Frame = -3

Query: 214 ATILHSLCDSNRFSEAHQRFSLFLASGYVPDHRTCNLFLARLLRSRTPLQTWDLVQSLIR 35
           ++I+H LCD+NRF+EAHQR  +FL S  VPD RTCN+ +ARLL S+ P +T +++  LI 
Sbjct: 89  SSIIHGLCDANRFNEAHQRLIIFLTSLCVPDERTCNVLVARLLHSKDPFRTLNVIHRLIE 148

Query: 34  AKPGFVPSLVN 2
            KP FVPSL+N
Sbjct: 149 FKPEFVPSLIN 159