BLASTX nr result

ID: Glycyrrhiza24_contig00026108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026108
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553334.1| PREDICTED: elongation factor Tu GTP-binding ...   308   8e-82
ref|XP_003609630.1| Elongation factor EF-2 [Medicago truncatula]...   302   5e-80
ref|XP_002885535.1| elongation factor Tu family protein [Arabido...   286   3e-75
ref|XP_002515715.1| translation elongation factor, putative [Ric...   285   5e-75
ref|NP_188938.1| elongation factor EF-2 [Arabidopsis thaliana] g...   285   7e-75

>ref|XP_003553334.1| PREDICTED: elongation factor Tu GTP-binding domain-containing
           protein 1-like [Glycine max]
          Length = 1022

 Score =  308 bits (789), Expect = 8e-82
 Identities = 154/171 (90%), Positives = 160/171 (93%)
 Frame = +2

Query: 227 SDRHKIRNICILAHVDHGKTTLADQLIATAGGGVVHPKVAGRVRFMDYLDEEQRRAITMK 406
           ++R  IRNICILAHVDHGKTTLAD LIA AGGGVVHPK+AGRVRFMDYLDEEQRRAITMK
Sbjct: 11  NERDLIRNICILAHVDHGKTTLADHLIAAAGGGVVHPKLAGRVRFMDYLDEEQRRAITMK 70

Query: 407 SSSIALTYRNNHTVNLIDSPGHIDFCGEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQC 586
           SSSI L Y   + VNLIDSPGHIDFC EVSTAARLSDGALLLVDAVEGVHIQTHAVLRQC
Sbjct: 71  SSSILLRYAGRYAVNLIDSPGHIDFCSEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQC 130

Query: 587 WIERLSPCLVLNKLDRLITELKLTPSEAYTRLLRIVHEVNGIVSAYKSQKY 739
           WIERL+PCLVLNKLDRLITELKLTPSEAYTRLLRIVHEVNGIVSAYKS+KY
Sbjct: 131 WIERLTPCLVLNKLDRLITELKLTPSEAYTRLLRIVHEVNGIVSAYKSEKY 181


>ref|XP_003609630.1| Elongation factor EF-2 [Medicago truncatula]
           gi|355510685|gb|AES91827.1| Elongation factor EF-2
           [Medicago truncatula]
          Length = 1026

 Score =  302 bits (773), Expect = 5e-80
 Identities = 152/171 (88%), Positives = 159/171 (92%)
 Frame = +2

Query: 227 SDRHKIRNICILAHVDHGKTTLADQLIATAGGGVVHPKVAGRVRFMDYLDEEQRRAITMK 406
           +DR KIRNICILAHVDHGKTTLADQLIA A GG+VHPKVAG+VRFMDYLDEEQRRAITMK
Sbjct: 9   NDRKKIRNICILAHVDHGKTTLADQLIAAASGGMVHPKVAGKVRFMDYLDEEQRRAITMK 68

Query: 407 SSSIALTYRNNHTVNLIDSPGHIDFCGEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQC 586
           SSSI+L Y N+HTVNLIDSPGHIDFCGEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQC
Sbjct: 69  SSSISLHY-NHHTVNLIDSPGHIDFCGEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQC 127

Query: 587 WIERLSPCLVLNKLDRLITELKLTPSEAYTRLLRIVHEVNGIVSAYKSQKY 739
           W E L PCLVLNK+DRLITEL LTP EAYTRLLRIVHEVNGI SAY S+KY
Sbjct: 128 WTEMLEPCLVLNKMDRLITELNLTPLEAYTRLLRIVHEVNGIWSAYNSEKY 178


>ref|XP_002885535.1| elongation factor Tu family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297331375|gb|EFH61794.1| elongation factor Tu
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1015

 Score =  286 bits (732), Expect = 3e-75
 Identities = 138/171 (80%), Positives = 163/171 (95%)
 Frame = +2

Query: 227 SDRHKIRNICILAHVDHGKTTLADQLIATAGGGVVHPKVAGRVRFMDYLDEEQRRAITMK 406
           S+  K+RNICILAHVDHGKTTLAD LIA++GGGV+HP++AG++RFMDYLDEEQRRAITMK
Sbjct: 4   SEGRKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRAITMK 63

Query: 407 SSSIALTYRNNHTVNLIDSPGHIDFCGEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQC 586
           SSSI+L Y++ +++NLIDSPGH+DFC EVSTAARLSDGAL+LVDAVEGVHIQTHAVLRQ 
Sbjct: 64  SSSISLRYKD-YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQA 122

Query: 587 WIERLSPCLVLNKLDRLITELKLTPSEAYTRLLRIVHEVNGIVSAYKSQKY 739
           WIE+L+PCLVLNK+DRLI+EL+L+P EAYTRL+RIVHEVNGIVSAYKS+KY
Sbjct: 123 WIEKLTPCLVLNKIDRLISELRLSPMEAYTRLIRIVHEVNGIVSAYKSEKY 173


>ref|XP_002515715.1| translation elongation factor, putative [Ricinus communis]
           gi|223545152|gb|EEF46662.1| translation elongation
           factor, putative [Ricinus communis]
          Length = 1028

 Score =  285 bits (730), Expect = 5e-75
 Identities = 139/170 (81%), Positives = 158/170 (92%)
 Frame = +2

Query: 230 DRHKIRNICILAHVDHGKTTLADQLIATAGGGVVHPKVAGRVRFMDYLDEEQRRAITMKS 409
           D  K+RNICILAHVDHGKTTLAD LIA  GGG++HPK+AG++RFMDYLDEEQRRAITMKS
Sbjct: 6   DARKVRNICILAHVDHGKTTLADHLIAATGGGLLHPKLAGKLRFMDYLDEEQRRAITMKS 65

Query: 410 SSIALTYRNNHTVNLIDSPGHIDFCGEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQCW 589
           SSIAL Y++ +++NLIDSPGH+DFC EVSTAARLSDGAL+LVDAVEGVHIQTHAVLRQ W
Sbjct: 66  SSIALHYKD-YSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQSW 124

Query: 590 IERLSPCLVLNKLDRLITELKLTPSEAYTRLLRIVHEVNGIVSAYKSQKY 739
           +E+LSPCLVLNK+DRLI ELKL+P EAY RLLRIVHEVNGI+SAYKS+KY
Sbjct: 125 LEKLSPCLVLNKIDRLICELKLSPMEAYNRLLRIVHEVNGIMSAYKSEKY 174


>ref|NP_188938.1| elongation factor EF-2 [Arabidopsis thaliana]
           gi|332643181|gb|AEE76702.1| elongation factor EF-2
           [Arabidopsis thaliana]
          Length = 1015

 Score =  285 bits (729), Expect = 7e-75
 Identities = 138/171 (80%), Positives = 162/171 (94%)
 Frame = +2

Query: 227 SDRHKIRNICILAHVDHGKTTLADQLIATAGGGVVHPKVAGRVRFMDYLDEEQRRAITMK 406
           S+  K+RNICILAHVDHGKTTLAD LIA++GGGV+HP++AG++RFMDYLDEEQRRAITMK
Sbjct: 4   SEGRKVRNICILAHVDHGKTTLADHLIASSGGGVLHPRLAGKLRFMDYLDEEQRRAITMK 63

Query: 407 SSSIALTYRNNHTVNLIDSPGHIDFCGEVSTAARLSDGALLLVDAVEGVHIQTHAVLRQC 586
           SSSI+L Y++ +++NLIDSPGH+DFC EVSTAARLSDGAL+LVDAVEGVHIQTHAVLRQ 
Sbjct: 64  SSSISLKYKD-YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQA 122

Query: 587 WIERLSPCLVLNKLDRLITELKLTPSEAYTRLLRIVHEVNGIVSAYKSQKY 739
           WIE+L+PCLVLNK+DRLI EL+L+P EAYTRL+RIVHEVNGIVSAYKS+KY
Sbjct: 123 WIEKLTPCLVLNKIDRLIFELRLSPMEAYTRLIRIVHEVNGIVSAYKSEKY 173


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