BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026100
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containi...    62   5e-08
ref|XP_003628782.1| Pentatricopeptide repeat-containing protein ...    60   2e-07
ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containi...    58   7e-07
emb|CBI28135.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06

>ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Glycine max]
          Length = 805

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/66 (53%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
 Frame = -3

Query: 190 LTPNQFPKKLPNTAIHHSNISVLCKEGRILEAVKSLSEGC---VHVGPDIYGELLQGCVY 20
           L P+  P+ L       ++ S LCK GRI EAV SL++     +HVGP IYG LLQGCVY
Sbjct: 4   LAPSHPPQTLTPNQFSLTHFSSLCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVY 63

Query: 19  ERALGL 2
           ERAL L
Sbjct: 64  ERALPL 69


>ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522804|gb|AET03258.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1002

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 34/62 (54%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
 Frame = -3

Query: 181 NQFPKKLPNTAIHHSNISVLCKEGRILEAVKSLSEGCVH--VGPDIYGELLQGCVYERAL 8
           N FP    NT +HH  IS LCK  ++ EA+ +LS+   H  +GPDIYGELLQGCVY R L
Sbjct: 63  NFFPTT--NTTLHHQ-ISFLCKNLKLQEAISTLSQLPQHTPIGPDIYGELLQGCVYARDL 119

Query: 7   GL 2
            L
Sbjct: 120 SL 121


>ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Cucumis sativus]
           gi|449520209|ref|XP_004167126.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Cucumis sativus]
          Length = 840

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/49 (59%), Positives = 36/49 (73%), Gaps = 3/49 (6%)
 Frame = -3

Query: 139 SNISVLCKEGRILEA---VKSLSEGCVHVGPDIYGELLQGCVYERALGL 2
           ++IS LCK+G +LEA   V  L    + +GPD+YGELLQGCVYERAL L
Sbjct: 48  NHISSLCKQGHLLEALDLVTDLELEDITIGPDVYGELLQGCVYERALSL 96


>emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
 Frame = -3

Query: 169  KKLPNTAIHHSNISVLCKEGRILEAVKSLSE---GCVHVGPDIYGELLQGCVYERAL 8
            + L  +  HH  IS LCK+G + E+V  LSE       +GP+IYGELLQGCVYERAL
Sbjct: 1136 RSLYKSYFHH--ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERAL 1190


>ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
 Frame = -3

Query: 169 KKLPNTAIHHSNISVLCKEGRILEAVKSLSE---GCVHVGPDIYGELLQGCVYERAL 8
           + L  +  HH  IS LCK+G + E+V  LSE       +GP+IYGELLQGCVYERAL
Sbjct: 41  RSLYKSYFHH--ISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERAL 95